Search result

BaseInfo

ncRNA ID	novel_vvi_miR749
Species	Vitis vinifera
Class	miRNA
Genome position	Chr1:10887462-10887513 [+]
Reference genome	12X
Source	SRR1528358;SRR1528374
Length	24
Mature sequence(if miRNA)	29 - CUAGACGGAACUCCAUUACUCAGA - 52
Stem-loop(if miRNA)	--   -A       C  A  A    CA   UGA  AGUGGAG UU UC UCUA  A   |||  ||||||| || || ||||  A   ACU  UUACCUC AA GG AGAU  A AG   CA       -  -  C    CG
Stem-loop sequence	UGAAAGUGGAGCUUAUCAUCUACAAAAGCUAGACGGAACUCCAUUACUCAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019225126.1	ncRNA:24   AGACUCAUUACCUCAAGGCAGAUC   1   |||*|||||||||||||||||||* targets:2872   UCUAAGUAAUGGAGUUCCGUCUAA   2895 Target Full Sequence	1.0	PREDICTED: Vitis vinifera uncharacterized LOC100247035 (LOC100247035), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_019225125.1	ncRNA:24   AGACUCAUUACCUCAAGGCAGAUC   1   |||*|||||||||||||||||||* targets:2887   UCUAAGUAAUGGAGUUCCGUCUAA   2910 Target Full Sequence	1.0	PREDICTED: Vitis vinifera uncharacterized LOC100247035 (LOC100247035), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010661665.2	ncRNA:24   AGACUCAUUACCUCAAGGCAGAUC   1   |||*|||||||||||||||||||* targets:3224   UCUAAGUAAUGGAGUUCCGUCUAA   3247 Target Full Sequence	1.0	PREDICTED: Vitis vinifera uncharacterized LOC100247035 (LOC100247035), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_019225124.1	ncRNA:24   AGACUCAUUACCUCAAGGCAGAUC   1   |||*|||||||||||||||||||* targets:3408   UCUAAGUAAUGGAGUUCCGUCUAA   3431 Target Full Sequence	1.0	PREDICTED: Vitis vinifera uncharacterized LOC100247035 (LOC100247035), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019225123.1	ncRNA:24   AGACUCAUUACCUCAAGGCAGAUC   1   |||*|||||||||||||||||||* targets:3413   UCUAAGUAAUGGAGUUCCGUCUAA   3436 Target Full Sequence	1.0	PREDICTED: Vitis vinifera uncharacterized LOC100247035 (LOC100247035), transcript variant X1, mRNA	NA	coding protein	psRNATarget