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BaseInfo

ncRNA ID lus-miR399g
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCAAAGGAGAUUUGCCCAG - NA
Stem-loop(if miRNA)     AAAA     UAU   A   ---AUC       -----A    UCA      U   A             AGUAG      AA   UAA   -GU  UCUU     U U
GUUG    GAGGG   UGA AGC      UGCAUGA      UGAA   CUGGGC AAU CUCUUUUGGCAGU     UUGAAA  GGC   GUA   GG    UUGGU G U
||||    |||||   ||| |||      |||||||      ||||   |||||| ||| |||||||||||||     ||||||  |||   |||   ||    ||||| |
CAAC    UUCUC   ACU UUG      ACGUACU      ACUU   GACCCG UUA GAGGAAACCGUCA     AACUUU  CCG   CAU   CC    AACCA C U
    ---G     --U   A   AAACAU       CGAUCG    UUC      U   -             -AACG      -G   UGG   GUG  -UUU     - G
Stem-loop sequence GUUGAAAAGAGGGUAUUGAAAGCAUCUGCAUGAAUGAAUCACUGGGCUAAUACUCUUUUGGCAGUAGUAGUUGAAAAAGGCUAAGUAGUGGUCUUUUGGUUGUUUGCACCAAUUUCCGUGUACGGUGCCGUUUCAAGCAAACUGCCAAAGGAGAUUUGCCCAGCUUUUCAGCUAGCUCAUGCAUACAAAGUUAUCAUCUCUUGCAAC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).