ncRNA ID | lus-miR399g |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCAAAGGAGAUUUGCCCAG - NA |
Stem-loop(if miRNA) |
    AAAA     UAU   A   ---AUC       -----A    UCA      U   A             AGUAG      AA   UAA   -GU  UCUU     U U GUUG    GAGGG   UGA AGC      UGCAUGA      UGAA   CUGGGC AAU CUCUUUUGGCAGU     UUGAAA  GGC   GUA   GG    UUGGU G U ||||    |||||   ||| |||      |||||||      ||||   |||||| ||| |||||||||||||     ||||||  |||   |||   ||    ||||| | CAAC    UUCUC   ACU UUG      ACGUACU      ACUU   GACCCG UUA GAGGAAACCGUCA     AACUUU  CCG   CAU   CC    AACCA C U     ---G     --U   A   AAACAU       CGAUCG    UUC      U   -             -AACG      -G   UGG   GUG  -UUU     - G |
Stem-loop sequence | GUUGAAAAGAGGGUAUUGAAAGCAUCUGCAUGAAUGAAUCACUGGGCUAAUACUCUUUUGGCAGUAGUAGUUGAAAAAGGCUAAGUAGUGGUCUUUUGGUUGUUUGCACCAAUUUCCGUGUACGGUGCCGUUUCAAGCAAACUGCCAAAGGAGAUUUGCCCAGCUUUUCAGCUAGCUCAUGCAUACAAAGUUAUCAUCUCUUGCAAC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |