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BaseInfo

ncRNA ID	novel_vvi_miR744
Species	Vitis vinifera
Class	miRNA
Genome position	Chr8:13017032-13017113 [+]
Reference genome	12X
Source	SRR1528358;SRR1528370;SRR1528371;SRR1048206;SRR1528380;SRR2029783;SRR2029784;SRR890731
Length	21
Mature sequence(if miRNA)	1 - UGCCUGGCUCCCUGUAUGCCA - 21
Stem-loop(if miRNA)	--   C       C              A   U C   CGA   UGC UGGCUCC UGUAUGCCAUUUGC AAG C ACC   G   ||| ||||||| |||||||||||||| ||| | |||   ACG ACCGAGG GCGUGCGGUAGGCG UUC G UGG   G GU   U       A              C   C A   UUA
Stem-loop sequence	UGCCUGGCUCCCUGUAUGCCAUUUGCAAAGUCCACCCGAGGAUUGGUAGCCUUCGCGGAUGGCGUGCGAGGAGCCAUGCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA142895.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||||||||||||||||| targets:726   UGGCAUACAGGGAGCCAGGCA   746 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_41650_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002282401.3	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:1899   AGGCAUACAGGGAGCCAGGCA   1919 Target Full Sequence	0.0	PREDICTED: Vitis vinifera auxin response factor 18 (LOC100256989), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_002273554.3	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:1863   AGGCAUACAGGGAGCCAGGCA   1883 Target Full Sequence	0.0	PREDICTED: Vitis vinifera auxin response factor 18 (LOC100265118), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010652870.2	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:1782   AGGCAUACAGGGAGCCAGGCA   1802 Target Full Sequence	0.0	PREDICTED: Vitis vinifera auxin response factor 18 (LOC100256989), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010660097.2	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:1550   AGGCAUACAGGGAGCCAGGCA   1570 Target Full Sequence	0.0	PREDICTED: Vitis vinifera auxin response factor 18 (LOC100265118), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019220515.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:1904   AGGCAUACAGGGAGCCAGGCA   1924 Target Full Sequence	0.0	PREDICTED: Vitis vinifera auxin response factor 18 (LOC100256989), transcript variant X3, mRNA	NA	coding protein	psRNATarget
KA163847.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   *|||||||||||||||||||| targets:1771   AGGCAUACAGGGAGCCAGGCA   1791 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_5786_Transcript_3/8_Confidence_0.409.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA151445.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:1709   UGGCAUGCAGGGAGCCAGGCA   1729 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_6640_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002281450.3	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:2430   UGGCAUGCAGGGAGCCAGGCA   2450 Target Full Sequence	1.0	PREDICTED: Vitis vinifera auxin response factor 18 (LOC100251645), mRNA	NA	coding protein	psRNATarget
XM_002284292.4	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:1707   UGGCAUGCAGGGAGCCAGGCA   1727 Target Full Sequence	1.0	PREDICTED: Vitis vinifera auxin response factor 17 (LOC100255673), mRNA	NA	coding protein	psRNATarget
FQ394421.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||=|||||||||||||| targets:1567   UGGCAUGCAGGGAGCCAGGCA   1587 Target Full Sequence	1.0	Vitis vinifera clone SS0AFA20YN23	NA	coding protein	psRNATarget
KA137213.1	ncRNA:21   ACCGUAUGUCCCUCGGUCCGU   1   ||||||*|||||||||||||| targets:215   UGGCAUUCAGGGAGCCAGGCA   235 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_47313_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget