ncRNA ID | novel_vvi_miR735 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr6:8931960-8932072 [-] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 24 |
Mature sequence(if miRNA) | 90 - AUGUUUGGCACUGAUUUUAGAAAA - 113 |
Stem-loop(if miRNA) |
--A         C      -U     ACU                  --AUU    GA    UGUUUGGCA UGAUUU  AGAAA   UUUCUAACCUUUCUAACA     GAAU  U    ||||||||| ||||||  |||||   ||||||||||||||||||     ||||  A    GCAAACCGU ACUAAG  UCUUU   GAAGAUUGGAAAGAUUGU     UUUA  A UGG         U      UU     -GC                  GAAGU    AA |
Stem-loop sequence | AUGUUUGGCACUGAUUUUAGAAAACUUUUCUAACCUUUCUAACAAUUGAAUGAUAAAAAUUUUGAAGUGUUAGAAAGGUUAGAAGCGUUUCUUUGAAUCAUUGCCAAACGGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA165339.1 |
|
0.0 | TSA: Vitis vinifera Locus_8677_Transcript_6/7_Confidence_0.714.Vivi mRNA sequence | NA | coding protein | psRNATarget |