ncRNA ID | lus-miR399f |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCAAAGGAGAUUUGCCCAG - NA |
Stem-loop(if miRNA) |
   UC  C AG  ---AGC       -A    UCA      U   A             --AG      -   UAA  AG    U        U U GGG  UG U  CU      UGCAUGA  UGAA   CUGGGC AAU CUUCUUUGGCAGU    UUGAAA GGC   GU  UUGG CAGUUGGU G U |||  || |  ||      |||||||  ||||   |||||| ||| |||||||||||||    |||||| |||   ||  |||| |||||||| | CCC  AC A  GA      ACGUACU  ACUU   GACCCG UUA GAGGAAACCGUCA    AACUUU CCG   CA  GACC GUUAACCA C U    CU  U CU  AAACAU       CG    UCC      U   -             AACA      G   UGG  CA    -        - G |
Stem-loop sequence | GGGUCUGCUAGCUAGCUGCAUGAAUGAAUCACUGGGCUAAUACUUCUUUGGCAGUAGUUGAAAGGCUAAGUAGUUGGUCAGUUGGUUGUUUGCACCAAUUGCCAGACACGGUGCCGUUUCAAACAAACUGCCAAAGGAGAUUUGCCCAGCCUUUCAGCUCAUGCAUACAAAAGUCAUCAUCCCC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |