ncRNA ID | ath-miR420 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr5:25230568-25230667 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 77 - UAAACUAAUCACGGAAAUGCA - 97 |
Stem-loop(if miRNA) |
UU       --AAUCAC      G  AAAAU    UACU   CUAUCAAC   CUAAACU        GGAAAU CA     UGGA    ACA        U   |||||||        |||||| ||     ||||    |||   GAUUUGA        CCUUUA GU     AUUU    UGU        U UU       GUAAUUUA      A  GCUCU    CUCU   UUUCUUUU |
Stem-loop sequence | UUCUAAACUAAUCACGGAAAUGCAAAAAUUGGAUACUACACUAUCAACUUUUUUCUUUUGUUCUCUUUAUCUCGUGAAUUUCCAUUUAAUGAGUUUAGUU |
1 | PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets"; Wang XJ, Reyes JL, Chua NH, Gaasterland T; Genome Biol. 5:R65(2004). |
2 | PMID:16669754
"MicroRNAS and their regulatory roles in plants"; Jones-Rhoades MW, Bartel DP, Bartel B; Annu Rev Plant Biol. 57:19-53(2006). |