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BaseInfo

ncRNA ID ath-miR420
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:25230568-25230667 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 77 - UAAACUAAUCACGGAAAUGCA - 97
Stem-loop(if miRNA) UU       --AAUCAC      G  AAAAU    UACU   CUAUCAAC
  CUAAACU        GGAAAU CA     UGGA    ACA        U
  |||||||        |||||| ||     ||||    |||
  GAUUUGA        CCUUUA GU     AUUU    UGU        U
UU       GUAAUUUA      A  GCUCU    CUCU   UUUCUUUU
Stem-loop sequence UUCUAAACUAAUCACGGAAAUGCAAAAAUUGGAUACUACACUAUCAACUUUUUUCUUUUGUUCUCUUUAUCUCGUGAAUUUCCAUUUAAUGAGUUUAGUU

Reference

1 PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets";
Wang XJ, Reyes JL, Chua NH, Gaasterland T;
Genome Biol. 5:R65(2004).
2 PMID:16669754
"MicroRNAS and their regulatory roles in plants";
Jones-Rhoades MW, Bartel DP, Bartel B;
Annu Rev Plant Biol. 57:19-53(2006).