ncRNA ID | novel_vvi_miR725 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr5:20962014-20962127 [+] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 23 |
Mature sequence(if miRNA) | 92 - UUAGAAUUACUGUCAAACACACU - 114 |
Stem-loop(if miRNA) |
--        GU   UAU                A  U  AC            AAU   UGUGUUUG  AGU   UUUUAGAAGUGUUUUU GU UU  UAGUACUUGAAA   A   ||||||||  |||   |||||||||||||||| || ||  ||||||||||||   A   ACACAAAC  UCA   AAGAUUUUUACAAAAA CA AA  AUUAUGGAUUUU   A UC        UG   -UU                A  U  AA            AAA |
Stem-loop sequence | UGUGUUUGGUAGUUAUUUUUAGAAGUGUUUUUAGUUUUACUAGUACUUGAAAAAUAAAAAAUUUUAGGUAUUAAAAAUACAAAAAACAUUUUUAGAAUUACUGUCAAACACACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA152600.1 |
|
1.0 | TSA: Vitis vinifera Locus_12264_Transcript_1/3_Confidence_0.333.Vivi mRNA sequence | NA | coding protein | psRNATarget |