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BaseInfo

ncRNA ID lus-miR399e
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCAAAGGAGAUUUGCCCGG - NA
Stem-loop(if miRNA) ---GCA   AUCUU   U  A  C   A A      UUA    C       A     -- UAGUACUAGCUAAAU
      ACG     GUA GG UG AUU C GGGCAA   CUCC UUGGCAG UAGCU  A               U
      |||     ||| || || ||| | ||||||   |||| ||||||| |||||  |
      UGC     UAU CC AC UAA G CCCGUU   GAGG AACCGUC ACUCG  U               G
CGAUCA   ---AU   C  A  U   C G      -UA    A       -     AA GACAUGAACAAACGA
Stem-loop sequence GCAACGAUCUUGUAUGGAUGCAUUACAGGGCAAUUACUCCCUUGGCAGAUAGCUAUAGUACUAGCUAAAUUGAGCAAACAAGUACAGUAAGCUCACUGCCAAAGGAGAUUUGCCCGGCAAUUCAACCCUAUUACGUACUAGC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).