ncRNA ID | novel_vvi_miR723 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:8415240-8415348 [-] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAAAACUCUCCCUCAAUCUUGGCC - 24 |
Stem-loop(if miRNA) |
--     U    CAA         ---    -GCUC      --UC   UUCU   UG   CCAAG UUGG   GGGGUUUUG   AAGU     UAAGGC    GGA    UCA  U   ||||| ||||   |||||||||   ||||     ||||||    |||    |||   GGUUC AACU   UCUCAAAAC   UUCG     GUUCCG    CCU    AGU  G CC     U    CCC         ACG    AUACC      UUCA   -UCU   UA |
Stem-loop sequence | CCAAGUUUGGCAAGGGGUUUUGAAGUGCUCUAAGGCUCGGAUUCUUCAUGUGAUUGAUCUUCCACUUGCCUUGCCAUAGCUUGCACAAAACUCUCCCUCAAUCUUGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010661747.2 |
|
2.0 | PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100245278), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_002277635.4 |
|
2.5 | PREDICTED: Vitis vinifera C2 and GRAM domain-containing protein At5g50170 (LOC100262229), mRNA | NA | coding protein | psRNATarget |