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BaseInfo

ncRNA ID novel_vvi_miR723
Species Vitis vinifera
Class miRNA
Genome position Chr4:8415240-8415348 [-]
Reference genome 12X
Source SRR1528358
Length 24
Mature sequence(if miRNA) 1 - CAAAACUCUCCCUCAAUCUUGGCC - 24
Stem-loop(if miRNA) --     U    CAA         ---    -GCUC      --UC   UUCU   UG
  CCAAG UUGG   GGGGUUUUG   AAGU     UAAGGC    GGA    UCA  U
  ||||| ||||   |||||||||   ||||     ||||||    |||    |||
  GGUUC AACU   UCUCAAAAC   UUCG     GUUCCG    CCU    AGU  G
CC     U    CCC         ACG    AUACC      UUCA   -UCU   UA
Stem-loop sequence CCAAGUUUGGCAAGGGGUUUUGAAGUGCUCUAAGGCUCGGAUUCUUCAUGUGAUUGAUCUUCCACUUGCCUUGCCAUAGCUUGCACAAAACUCUCCCUCAAUCUUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010661747.2
ncRNA:24   CCGG-UUCUAACUCCCUCUCAAAAC   1
  ||=|-=||*|||||||||||||||*
targets:5005   GGUCUGAGUUUGAGGGAGAGUUUUU   5029

2.0 PREDICTED: Vitis vinifera sugar transporter ERD6-like 5 (LOC100245278), transcript variant X2, mRNA NA coding protein psRNATarget
XM_002277635.4
ncRNA:24   CCGGUUCUAACUCCCUCUCAAAAC   1
  |||*==||||||*|||||||||||
targets:1681   GGCAGGGAUUGAAGGAGAGUUUUG   1704

2.5 PREDICTED: Vitis vinifera C2 and GRAM domain-containing protein At5g50170 (LOC100262229), mRNA NA coding protein psRNATarget