Search result

BaseInfo

ncRNA ID	novel_vvi_miR719
Species	Vitis vinifera
Class	miRNA
Genome position	Chr4:19427329-19427394 [+]
Reference genome	12X
Source	SRR1528358
Length	21
Mature sequence(if miRNA)	46 - UCGGCCCUGAACGUCUGCCCC - 66
Stem-loop(if miRNA)	--   ---        CU        -UCA   UUC   GGU   UGUUCAGG  GUCGAGUC    UCC   C   |||   ||||||||  ||||||||    |||   CCG   GCAAGUCC  CGGCUCAG    AGG   U CC   UCU        --        UAAC   UCU
Stem-loop sequence	GGUUGUUCAGGCUGUCGAGUCUCAUCCUUCCUUCUGGACAAUGACUCGGCCCUGAACGUCUGCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA140138.1	ncRNA:21   CCCCGUCUGCAAGUCCCGGCU   1   |*||||*||||||||*||||| targets:55   GUGGCAAACGUUCAGUGCCGA   75 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5724_Transcript_6/11_Confidence_0.574.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA140140.1	ncRNA:21   CCCCGUCUGCAAGUCCCGGCU   1   |*||||*||||||||*||||| targets:55   GUGGCAAACGUUCAGUGCCGA   75 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5724_Transcript_10/11_Confidence_0.511.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA140137.1	ncRNA:21   CCCCGUCUGCAAGUCCCGGCU   1   |*||||*||||||||*||||| targets:55   GUGGCAAACGUUCAGUGCCGA   75 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5724_Transcript_4/11_Confidence_0.553.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA140139.1	ncRNA:21   CCCCGUCUGCAAGUCCCGGCU   1   |*||||*||||||||*||||| targets:55   GUGGCAAACGUUCAGUGCCGA   75 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5724_Transcript_8/11_Confidence_0.532.Vivi mRNA sequence	NA	coding protein	psRNATarget