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BaseInfo

ncRNA ID novel_vvi_miR715
Species Vitis vinifera
Class miRNA
Genome position Chr11:13667296-13667378 [-]
Reference genome 12X
Source SRR1528358
Length 21
Mature sequence(if miRNA) 63 - UUGGUUCUUGAACUUGUGGCU - 83
Stem-loop(if miRNA) --                      AAAGG       ---   C
  UUGGUUCUUGAACUUGUGGCUA     GUUUUUU   AUG U
  ||||||||||||||||||||||     |||||||   |||
  AACCAAGAACUUGAACAUCGAU     CAAAGAA   UAC U
CA                      GUACA       CCC   G
Stem-loop sequence UUGGUUCUUGAACUUGUGGCUAAAAGGGUUUUUUAUGCUUGCAUCCCAAGAAACACAUGUAGCUACAAGUUCAAGAACCAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA171890.1
ncRNA:21   UCGGUGUUCAAGUUCUUGGUU   1
  **|||||=||||||||||||=
targets:270   CUCCACAGGUUCAAGAACCAG   290

2.0 TSA: Vitis vinifera Locus_11364_Transcript_7/10_Confidence_0.038.Vivi mRNA sequence NA coding protein psRNATarget
XM_003632815.3
ncRNA:21   UCGGUGUUCAAGUUCUUGGUU   1
  **|||||=||||||||||||=
targets:236   CUCCACAGGUUCAAGAACCAG   256

2.0 PREDICTED: Vitis vinifera probable sulfate transporter 3.4 (LOC100267000), mRNA NA coding protein psRNATarget