ncRNA ID | novel_vvi_miR715 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:13667296-13667378 [-] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 21 |
Mature sequence(if miRNA) | 63 - UUGGUUCUUGAACUUGUGGCU - 83 |
Stem-loop(if miRNA) |
--                      AAAGG       ---   C   UUGGUUCUUGAACUUGUGGCUA     GUUUUUU   AUG U   ||||||||||||||||||||||     |||||||   |||   AACCAAGAACUUGAACAUCGAU     CAAAGAA   UAC U CA                      GUACA       CCC   G |
Stem-loop sequence | UUGGUUCUUGAACUUGUGGCUAAAAGGGUUUUUUAUGCUUGCAUCCCAAGAAACACAUGUAGCUACAAGUUCAAGAACCAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA171890.1 |
|
2.0 | TSA: Vitis vinifera Locus_11364_Transcript_7/10_Confidence_0.038.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_003632815.3 |
|
2.0 | PREDICTED: Vitis vinifera probable sulfate transporter 3.4 (LOC100267000), mRNA | NA | coding protein | psRNATarget |