ncRNA ID | lus-miR399d |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCAAAGGAGAAUUGCCCUG - NA |
Stem-loop(if miRNA) |
--CUC U UU A -UAA C - U ------AU UAAUUG G GAG UG GUGG G GGAA CAGGGCAGU CUCCUUUGGCGGA C GAA CAUGC GA A ||| || |||| | |||| ||||||||| ||||||||||||| | ||| ||||| || CUC AC CACC C CCUU GUCCCGUUA GAGGAAACCGUUU G CUU GUACG CU A CUAAA - CU - UACC A C U CCCAUAAC ----UA A |
Stem-loop sequence | GAGCUCUGUGUGGUUGAGGAAUAACAGGGCAGUCCUCCUUUGGCGGACUGAAAUCAUGCUAAUUGGAGAAAUCAUGCAUGCAAUACCCUUCUGCUUUGCCAAAGGAGAAUUGCCCUGCCAUUUCCCUCCCACCAAAAUCCUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |