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BaseInfo

ncRNA ID lus-miR399d
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCAAAGGAGAAUUGCCCUG - NA
Stem-loop(if miRNA)    --CUC  U    UU A    -UAA         C             - U   ------AU     UAAUUG  G
GAG     UG GUGG  G GGAA    CAGGGCAGU CUCCUUUGGCGGA C GAA        CAUGC      GA A
|||     || ||||  | ||||    ||||||||| ||||||||||||| | |||        |||||      ||
CUC     AC CACC  C CCUU    GUCCCGUUA GAGGAAACCGUUU G CUU        GUACG      CU A
   CUAAA  -    CU -    UACC         A             C U   CCCAUAAC     ----UA  A
Stem-loop sequence GAGCUCUGUGUGGUUGAGGAAUAACAGGGCAGUCCUCCUUUGGCGGACUGAAAUCAUGCUAAUUGGAGAAAUCAUGCAUGCAAUACCCUUCUGCUUUGCCAAAGGAGAAUUGCCCUGCCAUUUCCCUCCCACCAAAAUCCUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).