ncRNA ID | lus-miR399d |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCAAAGGAGAAUUGCCCUG - NA |
Stem-loop(if miRNA) |
   --CUC  U    UU A    -UAA         C             - U   ------AU     UAAUUG  G GAG     UG GUGG  G GGAA    CAGGGCAGU CUCCUUUGGCGGA C GAA        CAUGC      GA A |||     || ||||  | ||||    ||||||||| ||||||||||||| | |||        |||||      || CUC     AC CACC  C CCUU    GUCCCGUUA GAGGAAACCGUUU G CUU        GUACG      CU A    CUAAA  -    CU -    UACC         A             C U   CCCAUAAC     ----UA  A |
Stem-loop sequence | GAGCUCUGUGUGGUUGAGGAAUAACAGGGCAGUCCUCCUUUGGCGGACUGAAAUCAUGCUAAUUGGAGAAAUCAUGCAUGCAAUACCCUUCUGCUUUGCCAAAGGAGAAUUGCCCUGCCAUUUCCCUCCCACCAAAAUCCUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |