ncRNA ID | novel_vvi_miR705 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr1:9200651-9200740 [+] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AGUAUCUUAUAUUUUUUUGGAG - 22 |
Stem-loop(if miRNA) |
--    UCUU            AG   ---GAG UG CAAAGGCUGUU   AGUA    AUAUUUUUUUGG  GAU      U  A           G   ||||    ||||||||||||  |||      |  |   UCAU    UAUAGGAAAACC  UUG      C  U           A UU    -UCC            GG   UGUACA -- AGAAAGGAAGG |
Stem-loop sequence | AGUAUCUUAUAUUUUUUUGGAGGAUGAGUUGACAAAGGCUGUUGAGGAAGGAAAGAUCACAUGUGUUGGCCAAAAGGAUAUCCUUACUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA150630.1 |
|
3.0 | TSA: Vitis vinifera Locus_11848_Transcript_1/4_Confidence_0.667.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA150631.1 |
|
3.0 | TSA: Vitis vinifera Locus_11848_Transcript_3/4_Confidence_0.667.Vivi mRNA sequence | NA | coding protein | psRNATarget |