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BaseInfo

ncRNA ID	novel_vvi_miR701
Species	Vitis vinifera
Class	miRNA
Genome position	Chr19:22568052-22568110 [-]
Reference genome	12X
Source	SRR1528358;SRR1528391
Length	24
Mature sequence(if miRNA)	1 - CGUUUGAGAGUGAUUUUAGAAAGC - 24
Stem-loop(if miRNA)	--              AC          C   UUUCUAGAAUCACU  CAAAUGCAUU U   ||||||||||||||  |||||||||| A   AAAGAUUUUAGUGA  GUUUGCGUGA A CG              GA          U
Stem-loop sequence	UUUCUAGAAUCACUACCAAAUGCAUUCUAAUAGUGCGUUUGAGAGUGAUUUUAGAAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA155688.1	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   ||||||||=||||||||||||||| targets:1548   GCUUUCUAGAAUCACUCUCAAACG   1571 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_13686_Transcript_2/6_Confidence_0.571.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA168752.1	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   |=||||||||||||||*||||||* targets:1239   GUUUUCUAAAAUCACUAUCAAACA   1262 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_612_Transcript_1/10_Confidence_0.462.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA166591.1	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   ||||*|||||||||||*||||||* targets:888   GCUUCCUAAAAUCACUGUCAAACA   911 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1103_Transcript_2/9_Confidence_0.406.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002271269.3	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   *||||*|||||||||||*|||||| targets:4095   UCUUUAUAAAAUCACUCCCAAACG   4118 Target Full Sequence	2.5	PREDICTED: Vitis vinifera ABC transporter B family member 9-like (LOC100265902), mRNA	NA	coding protein	psRNATarget
KA141295.1	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   *|||*|||||||||||*||||||* targets:671   ACUUCCUAAAAUCACUAUCAAACA   694 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_7662_Transcript_5/10_Confidence_0.136.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA146990.1	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   *|||*|||||||||||*||||||* targets:3470   ACUUCCUAAAAUCACUAUCAAACA   3493 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5272_Transcript_7/11_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010662451.2	ncRNA:24   CGAAAGAUUUUAGUGAGAGUUUGC   1   |||*|*|||*|||||||||||||* targets:63   GCUAUAUAAUAUCACUCUCAAACU   86 Target Full Sequence	3.0	PREDICTED: Vitis vinifera uncharacterized LOC104881649 (LOC104881649), transcript variant X1, mRNA	NA	coding protein	psRNATarget