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BaseInfo

ncRNA ID novel_vvi_miR699
Species Vitis vinifera
Class miRNA
Genome position Chr10:1222390-1222473 [+]
Reference genome 12X
Source SRR1528358;SRR1528370;SRR1528371;SRR1048201;SRR1528378;SRR1528387;SRR1528391
Length 21
Mature sequence(if miRNA) 64 - GCAUGAGGGGAGUCAAGCAGG - 84
Stem-loop(if miRNA) --   C         GA      UC  A    C       AG
  UGC UGGCUCCCU  AUGCCA  UA GAAG UUGUUAA  A
  ||| |||||||||  ||||||  || |||| |||||||
  ACG ACUGAGGGG  UACGGU  AU CUUC AACAGUU  G
GG   A         AG      UU  C    C       GU
Stem-loop sequence UGCCUGGCUCCCUGAAUGCCAUCUAAGAAGCUUGUUAAAGAGUGUUGACAACCUUCCUAUUUGGCAUGAGGGGAGUCAAGCAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA137213.1
ncRNA:21   GGACGAACUGAGGGGAGUACG   1
  |||||||||||||||||||||
targets:152   CCUGCUUGACUCCCCUCAUGC   172

0.0 TSA: Vitis vinifera Locus_47313_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget