ncRNA ID | novel_vvi_miR693 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr17:2378220-2378305 [-] |
Reference genome | 12X |
Source | SRR1528358;SRR1048207 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGGGAGAUGACUACUGGAAGC - 21 |
Stem-loop(if miRNA) |
--      C          AA  U      AAAC UG   --  C   UUCCAG AGUCAUCUCC  GG GGAGCA    U  AUU  GC C   |||||| ||||||||||  || ||||||    |  |||  ||   AAGGUC UCAGUAGAGG  CC CCUCGU    A  UAA  CG U CG      A          GC  U      --CU GU   GU  U |
Stem-loop sequence | UUCCAGCAGUCAUCUCCAAGGUGGAGCAAAACUUGAUUGCCCUUGCUGAAUUGAUCUGCUCCUCCCGGGAGAUGACUACUGGAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658062.2 |
|
3.0 | PREDICTED: Vitis vinifera uncharacterized LOC100256125 (LOC100256125), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010658063.2 |
|
3.0 | PREDICTED: Vitis vinifera uncharacterized LOC100256125 (LOC100256125), transcript variant X4, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_002284712.3 |
|
3.0 | PREDICTED: Vitis vinifera uncharacterized LOC100256125 (LOC100256125), transcript variant X1, mRNA | NA | coding protein | psRNATarget |