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BaseInfo

ncRNA ID	novel_vvi_miR692
Species	Vitis vinifera
Class	miRNA
Genome position	Chr17:2609213-2609382 [-]
Reference genome	12X
Source	SRR1528358;SRR1528371;SRR1528375;SRR1049289;SRR2029783;SRR2029784
Length	21
Mature sequence(if miRNA)	1 - UUUGGAUUGAAGGGAGCUCUA - 21
Stem-loop(if miRNA)	--         GA       UA        -U   -      AU  -    G    CU    G UC      C       --C   AA   GAGCUCCUU  AGUCCAA  GAGGGUCU  ACU GGGUAG  UG AGCU CUGA  UAUG A  CCACAG CCUAUCC   GUC  U   |||||||||  |||||||  ||||||||  ||| ||||||  || |||| ||||  |||| |  |||||| |||||||   |||  G   CUCGAGGGA  UUAGGUU  UUCCUAGA  UGA CCUAUU  AC UCGA GACU  AUAC U  GGUGUU GGAUAGG   CGG  G AU         AG       UG        UU   A      --  G    G    CU    G UC      C       UUA   GG
Stem-loop sequence	GAGCUCCUUGAAGUCCAAUAGAGGGUCUUACUGGGUAGAUUGAGCUGCUGACUUAUGGAUCCCACAGCCCUAUCCCGUCAAUGGGGGGCAUUGGAUAGGCUUGUGGCUUGCAUAUCUCAGGAGCUGCAUUAUCCAAGUUUAGAUCCUUGUUUGGAUUGAAGGGAGCUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KX639825.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:957   UGGAGCUCCCUUCACUCCAAU   977 Target Full Sequence	2.5	UNVERIFIED: Vitis vinifera GAMYB-like mRNA, complete sequence	NA	coding protein	psRNATarget
XM_019217706.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1076   UGGAGCUCCCUUCACUCCAAU   1096 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_019217705.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1430   UGGAGCUCCCUUCACUCCAAU   1450 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_019217704.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1437   UGGAGCUCCCUUCACUCCAAU   1457 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X5, mRNA	NA	coding protein	psRNATarget
KA143670.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1423   UGGAGCUCCCUUCACUCCAAU   1443 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3605_Transcript_9/9_Confidence_0.444.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010647229.2	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1482   UGGAGCUCCCUUCACUCCAAU   1502 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010647226.2	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1489   UGGAGCUCCCUUCACUCCAAU   1509 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_002275810.4	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1749   UGGAGCUCCCUUCACUCCAAU   1769 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010647228.2	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   |=||||||||||||*|||||* targets:1818   UGGAGCUCCCUUCACUCCAAU   1838 Target Full Sequence	2.5	PREDICTED: Vitis vinifera transcription factor GAMYB (LOC100248959), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010657187.2	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   ||||||*||||||||*||||| targets:1029   UAGAGCACCCUUCAAACCAAA   1049 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC104880484 (LOC104880484), mRNA	NA	coding protein	psRNATarget
KA154464.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   ||||||*||||||||*||||| targets:842   UAGAGCCCCCUUCAAACCAAA   862 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1556_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010645844.2	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   ||||||*||||||||*||||| targets:1400   UAGAGCCCCCUUCAAACCAAA   1420 Target Full Sequence	2.5	PREDICTED: Vitis vinifera protein SPEAR2 (LOC104877499), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019216918.1	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   ||||||*||||||||*||||| targets:1315   UAGAGCCCCCUUCAAACCAAA   1335 Target Full Sequence	2.5	PREDICTED: Vitis vinifera protein SPEAR2 (LOC104877499), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_002277967.3	ncRNA:21   AUCUCGAGGGAAGUUAGGUUU   1   *||||||||||||||*||||* targets:1975   CAGAGCUCCCUUCAAGCCAAU   1995 Target Full Sequence	2.5	PREDICTED: Vitis vinifera protein ODORANT1 (LOC100262343), mRNA	NA	coding protein	psRNATarget