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BaseInfo

ncRNA ID novel_vvi_miR691
Species Vitis vinifera
Class miRNA
Genome position Chr11:13564409-13564460 [+]
Reference genome 12X
Source SRR1528358;SRR1528387;SRR1528391;SRR1528396;SRR1528410
Length 24
Mature sequence(if miRNA) 29 - UUUAGGUUAGACUUAGUUAGGCCC - 52
Stem-loop(if miRNA) --    A          C       U
  GUUU GAUUAGGUUU ACUUAGG G
  |||| |||||||||| ||||||| C
  CGGA UUGAUUCAGA UGGAUUU A
CC    -          U       C
Stem-loop sequence GUUUAGAUUAGGUUUCACUUAGGUGCACUUUAGGUUAGACUUAGUUAGGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010650649.2
ncRNA:24   CCCGGAUUGAUUCAGAUUGGAUUU   1
  |||=||||||||||||||||||||
targets:1998   GGGUCUAACUAAGUCUAACCUAAA   2021

0.0 PREDICTED: Vitis vinifera formamidopyrimidine-DNA glycosylase (LOC100258664), transcript variant X2, mRNA NA coding protein psRNATarget