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BaseInfo

ncRNA ID lus-miR399a
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGCCAAAGGAGAUUUGCCCGG - NA
Stem-loop(if miRNA)    AU     A  G    -----   U  GA    A A        AC    A            -          U  GUACUA
AGA  GAAUG GU UCGG     AGU GA  AAUC C GGGCAAGU  CUCU UUGGCAGGCAGU CACUUAGACA AU      A
|||  ||||| || ||||     ||| ||  |||| | ||||||||  |||| |||||||||||| |||||||||| ||
UCU  CUUGU CA AGCU     UCA CU  UUAG G CCCGUUUA  GAGG AACCGUCUGUUA GUGAAUCUGU UA      U
   GC     A  A    AUUCG   C  UC    C G        --    A            C          U  ACUUUU
Stem-loop sequence AGAAUGAAUGAGUGUCGGAGUUGAGAAAUCACAGGGCAAGUACCUCUAUUGGCAGGCAGUCACUUAGACAUAUGUACUAAUUUUUCAAUUUGUCUAAGUGCAUUGUCUGCCAAAGGAGAUUUGCCCGGCGAUUCUUCCACUGCUUAUCGAAACAUGUUCCGUCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).