ncRNA ID | lus-miR399a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCCAAAGGAGAUUUGCCCGG - NA |
Stem-loop(if miRNA) |
   AU     A  G    -----   U  GA    A A        AC    A            -          U  GUACUA AGA  GAAUG GU UCGG     AGU GA  AAUC C GGGCAAGU  CUCU UUGGCAGGCAGU CACUUAGACA AU      A |||  ||||| || ||||     ||| ||  |||| | ||||||||  |||| |||||||||||| |||||||||| || UCU  CUUGU CA AGCU     UCA CU  UUAG G CCCGUUUA  GAGG AACCGUCUGUUA GUGAAUCUGU UA      U    GC     A  A    AUUCG   C  UC    C G        --    A            C          U  ACUUUU |
Stem-loop sequence | AGAAUGAAUGAGUGUCGGAGUUGAGAAAUCACAGGGCAAGUACCUCUAUUGGCAGGCAGUCACUUAGACAUAUGUACUAAUUUUUCAAUUUGUCUAAGUGCAUUGUCUGCCAAAGGAGAUUUGCCCGGCGAUUCUUCCACUGCUUAUCGAAACAUGUUCCGUCU |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |