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BaseInfo

ncRNA ID	novel_vvi_miR682
Species	Vitis vinifera
Class	miRNA
Genome position	Chr16:16073964-16074012 [+]
Reference genome	12X
Source	SRR1528358
Length	24
Mature sequence(if miRNA)	1 - AUUUUCCUGGAACCAAACAUAGCC - 24
Stem-loop(if miRNA)	--       U            AG   AUUUUCC GGAACCAAACAU  C   ||||||| ||||||||||||  C   UGAAAGG CCUUGGUUUGUA  U CA       C            AU
Stem-loop sequence	AUUUUCCUGGAACCAAACAUAGCCUUAAUGUUUGGUUCCCGGAAAGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA157376.1	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   *|||||||||||||=||||||||| targets:2622   UGCUAUGUUUGGUUUCAGGAAAAU   2645 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_13516_Transcript_2/3_Confidence_0.444.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010653558.2	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   ||||||||||||||||*||||||| targets:1022   GGCUAUGUUUGGUUCCCGGAAAAU   1045 Target Full Sequence	1.5	PREDICTED: Vitis vinifera secoisolariciresinol dehydrogenase-like (LOC100260340), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010653559.2	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   ||||||||||||||||*||||||| targets:1028   GGCUAUGUUUGGUUCCCGGAAAAU   1051 Target Full Sequence	1.5	PREDICTED: Vitis vinifera secoisolariciresinol dehydrogenase-like (LOC100260340), transcript variant X2, mRNA	NA	coding protein	psRNATarget
KA138785.1	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   ||=|||||||||||||*||||||| targets:4024   GGUUAUGUUUGGUUCCCGGAAAAU   4047 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_13117_Transcript_3/7_Confidence_0.591.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002276352.3	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   *|=|||||||||||||||*||||| targets:999   UGUUAUGUUUGGUUCCAGAAAAAU   1022 Target Full Sequence	1.5	PREDICTED: Vitis vinifera uncharacterized LOC100245724 (LOC100245724), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010665285.2	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   *|=|||||||||||||||*||||| targets:1002   UGUUAUGUUUGGUUCCAGAAAAAU   1025 Target Full Sequence	1.5	PREDICTED: Vitis vinifera uncharacterized LOC100245724 (LOC100245724), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010665286.2	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   *|=|||||||||||||||*||||| targets:1002   UGUUAUGUUUGGUUCCAGAAAAAU   1025 Target Full Sequence	1.5	PREDICTED: Vitis vinifera uncharacterized LOC100245724 (LOC100245724), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019222801.1	ncRNA:24   CCGAUACAAACCAAGGUCCUUUUA   1   **=|=|||||||||=||||||||| targets:1249   UCUUGUGUUUGGUUUCAGGAAAAU   1272 Target Full Sequence	1.5	PREDICTED: Vitis vinifera 2-alkenal reductase (NADP(+)-dependent) (LOC100249583), transcript variant X2, mRNA	NA	coding protein	psRNATarget