ncRNA ID | novel_vvi_miR681 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:1167884-1167938 [+] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 24 |
Mature sequence(if miRNA) | 32 - UUGAGAACAAUUUUUAAGAACAGU - 55 |
Stem-loop(if miRNA) |
--            C      G    A   UGUUUUUGAAAA UGUUCU GAAA C   |||||||||||| |||||| |||| A   ACAAGAAUUUUU ACAAGA UUUU G UG            A      G    U |
Stem-loop sequence | UGUUUUUGAAAACUGUUCUGGAAAACAGUUUUUGAGAACAAUUUUUAAGAACAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA154251.1 |
|
1.5 | TSA: Vitis vinifera Locus_1611_Transcript_8/10_Confidence_0.513.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA137959.1 |
|
2.5 | TSA: Vitis vinifera Locus_1006_Transcript_31/34_Confidence_0.062.Vivi mRNA sequence | NA | coding protein | psRNATarget |