ncRNA ID | novel_vvi_miR680 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:10032008-10032067 [+] |
Reference genome | 12X |
Source | SRR1528358;SRR1049291 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCCCAUCACUUAUCCUAUCCUAUG - 24 |
Stem-loop(if miRNA) |
--              C           CA   UCCCAUCACUUAUC UAUCCUAUGUU  A   |||||||||||||| |||||||||||   AGGGUAGUGAAUAG AUAGGAUACAA  C AU              A           AC |
Stem-loop sequence | UCCCAUCACUUAUCCUAUCCUAUGUUCAACCAAACAUAGGAUAAGAUAAGUGAUGGGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA153571.1 |
|
1.5 | TSA: Vitis vinifera Locus_69959_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |