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BaseInfo

ncRNA ID novel_vvi_miR679
Species Vitis vinifera
Class miRNA
Genome position Chr16:8788232-8788282 [+]
Reference genome 12X
Source SRR1528358
Length 21
Mature sequence(if miRNA) 1 - CUUGGUGAAUCAUGAUAACUG - 21
Stem-loop(if miRNA) --    --G            AC   U
  CUUG   UGAAUCAUGAUA  UGA A
  ||||   ||||||||||||  ||| G
  GGAU   ACUUAGUACUGU  AUU C
CU    AUA            --   U
Stem-loop sequence CUUGGUGAAUCAUGAUAACUGAUAGCUUUAUGUCAUGAUUCAAUAUAGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA163938.1
ncRNA:21   GUC-AAUAGUACUAAGUGGUUC   1
  |||-|||||||||||||||||*
targets:3115   CAGAUUAUCAUGAUUCACCAAU   3136

3.0 TSA: Vitis vinifera Locus_1866_Transcript_9/10_Confidence_0.429.Vivi mRNA sequence NA coding protein psRNATarget