ncRNA ID | novel_vvi_miR679 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:8788232-8788282 [+] |
Reference genome | 12X |
Source | SRR1528358 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUUGGUGAAUCAUGAUAACUG - 21 |
Stem-loop(if miRNA) |
--    --G            AC   U   CUUG   UGAAUCAUGAUA  UGA A   ||||   ||||||||||||  ||| G   GGAU   ACUUAGUACUGU  AUU C CU    AUA            --   U |
Stem-loop sequence | CUUGGUGAAUCAUGAUAACUGAUAGCUUUAUGUCAUGAUUCAAUAUAGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA163938.1 |
|
3.0 | TSA: Vitis vinifera Locus_1866_Transcript_9/10_Confidence_0.429.Vivi mRNA sequence | NA | coding protein | psRNATarget |