ncRNA ID | novel_vvi_miR678 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr10:1800904-1800983 [-] |
Reference genome | 12X |
Source | SRR1528358;SRR1528371;SRR1528380;SRR1528381;SRR1528391;SRR1528406 |
Length | 24 |
Mature sequence(if miRNA) | 57 - UUAAAGCCGUAGUUGGUGACUAUG - 80 |
Stem-loop(if miRNA) |
--                         -C      CA  U   UUAAAGCCGUAGUUGGUGACUAUGG  UUGAAU  UU U   |||||||||||||||||||||||||  ||||||  || U   AAUUUUGGCAUCAACCACUGAUGUC  AACUUA  AA A CA                         AA      AG  A |
Stem-loop sequence | UUAAAGCCGUAGUUGGUGACUAUGGCUUGAAUCAUUUUUAAAAGAAUUCAAAACUGUAGUCACCAACUACGGUUUUAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
0.0 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |