ncRNA ID | novel_vvi_miR674 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:99965-100068 [-] |
Reference genome | 12X |
Source | SRR1528358;SRR1528359;SRR1528364;SRR1528374 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUCAUGUUGGGUCUUCUGAUU - 24 |
Stem-loop(if miRNA) |
--  U    GU             G             UUGCA      AAAU   UC GAAG  CCAACAUGGAAAU AUGCUUAAAACAA     AGUAGU    C   || ||||  ||||||||||||| |||||||||||||     ||||||    A   AG CUUC  GGUUGUACUUUUA UACGAAUUUUGUU     UUAUCG    A UU  U    UG             A             ---UA      AACA |
Stem-loop sequence | UCUGAAGGUCCAACAUGGAAAUGAUGCUUAAAACAAUUGCAAGUAGUAAAUCAAACAAGCUAUUAUUUGUUUUAAGCAUAAUUUUCAUGUUGGGUCUUCUGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA145166.1 |
|
2.0 | TSA: Vitis vinifera Locus_8476_Transcript_3/7_Confidence_0.389.Vivi mRNA sequence | NA | coding protein | psRNATarget |