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BaseInfo

ncRNA ID	novel_vvi_miR663
Species	Vitis vinifera
Class	miRNA
Genome position	Chr15:185215-185261 [+]
Reference genome	12X
Source	SRR1528358
Length	21
Mature sequence(if miRNA)	27 - CCCAGAUGGUACCAGGAGGGC - 47
Stem-loop(if miRNA)	--      AA         CA U   CCUCCU  UACCAUCUG  C A   ||||||  |||||||||  | G   GGAGGA  AUGGUAGAC  G U CG      CC         CC A
Stem-loop sequence	CCUCCUAAUACCAUCUGCACUAGUAGCCCAGAUGGUACCAGGAGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA140866.1	ncRNA:21   CGGGAGGACCAUGGUAGACCC   1   ||||||||||||||||||||| targets:2114   GCCCUCCUGGUACCAUCUGGG   2134 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_10445_Transcript_8/9_Confidence_0.621.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA172131.1	ncRNA:21   CGGGAGGACCAUGGUAGACCC   1   |||||||||||||||||||*| targets:384   GCCCUCCUGGUACCAUCUGAG   404 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_19677_Transcript_4/5_Confidence_0.826.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010662237.2	ncRNA:21   CGGGAGGACCAUGGUAGACCC   1   **=||||||||||||||*||| targets:409   CAUCUCCUGGUACCAUCCGGG   429 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC104881618 (LOC104881618), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010662238.2	ncRNA:21   CGGGAGGACCAUGGUAGACCC   1   **=||||||||||||||*||| targets:409   CAUCUCCUGGUACCAUCCGGG   429 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC104881618 (LOC104881618), transcript variant X1, mRNA	NA	coding protein	psRNATarget