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BaseInfo

ncRNA ID	novel_vvi_miR649
Species	Vitis vinifera
Class	miRNA
Genome position	Chr14:28619576-28619645 [+]
Reference genome	12X
Source	SRR1528358;SRR1528359;SRR1528364;SRR1528365;SRR1528368;SRR1528369;SRR1528370;SRR1528371;SRR1528376;SRR1528384;SRR1528406;SRR1528407;SRR1528408;SRR1528410
Length	22
Mature sequence(if miRNA)	1 - UUGCCGCACGAGAGAUGGCACC - 22
Stem-loop(if miRNA)	--        C            C     UUU  UA   UUGCCGCA GAGAGAUGGCAC UGCUC   CA  U   |||||||| |||||||||||| |||||   ||  A   AACGGUGU CUUUCUACCGUG ACGGG   GU  U AC        -            A     --U  UG
Stem-loop sequence	UUGCCGCACGAGAGAUGGCACCUGCUCUUUCAUAUAUGUUGUGGGCAAGUGCCAUCUUUCUGUGGCAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010656858.2	ncRNA:22   CCACGGUAGAGAGCACGCCGUU   1   ||*||||||||||||||||||= targets:432   GGCGCCAUCUCUCGUGCGGCAG   453 Target Full Sequence	1.0	PREDICTED: Vitis vinifera calcium-transporting ATPase 9, plasma membrane-type (LOC100253521), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_010656859.2	ncRNA:22   CCACGGUAGAGAGCACGCCGUU   1   ||*||||||||||||||||||= targets:432   GGCGCCAUCUCUCGUGCGGCAG   453 Target Full Sequence	1.0	PREDICTED: Vitis vinifera calcium-transporting ATPase 9, plasma membrane-type (LOC100253521), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_010656860.2	ncRNA:22   CCACGGUAGAGAGCACGCCGUU   1   ||*||||||||||||||||||= targets:432   GGCGCCAUCUCUCGUGCGGCAG   453 Target Full Sequence	1.0	PREDICTED: Vitis vinifera calcium-transporting ATPase 9, plasma membrane-type (LOC100253521), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_002275038.4	ncRNA:22   CCACGGUAGAGAGCACGCCGUU   1   ||*||||||||||||||||||= targets:432   GGCGCCAUCUCUCGUGCGGCAG   453 Target Full Sequence	1.0	PREDICTED: Vitis vinifera calcium-transporting ATPase 9, plasma membrane-type (LOC100253521), transcript variant X1, mRNA	NA	coding protein	psRNATarget