| ncRNA ID | novel_vvi_miR648 |
| Species | Vitis vinifera |
| Class | miRNA |
| Genome position | Chr14:1953447-1953650 [+] |
| Reference genome | 12X |
| Source | SRR1528358 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UUUUGGCUGAAUACACUUAAC - 21 |
| Stem-loop(if miRNA) |
--U AA UAU A A --GA GAA UAC UUUGGCUGAAUACACUU CCGU UGGUUUGAA UUUCAUCAAAU CCCUCCUUAUUUUGAGAGAGA AGAGGU UGAAAAUGACAAAUGAAAA C ||||||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| AAACCGAUUUAUGUGAG GGUA ACCAAACUU AAAGUAGUUUA GGGAGGAAUAAAACUCUCUCU UCUCCA ACUUUUACUGUUUACUUUU C CCU -- --- C C AUCC --- CCU |
| Stem-loop sequence | UUUUGGCUGAAUACACUUAACCGUUAUUGGUUUGAAAUUUCAUCAAAUACCCUCCUUAUUUUGAGAGAGAGAAGAGGUGAAUGAAAAUGACAAAUGAAAAUACCCUCCUUUUCAUUUGUCAUUUUCAACCUCUCCUAUCUCUCUCAAAAUAAGGAGGGCAUUUGAUGAAACUUCAAACCAAUGGGAGUGUAUUUAGCCAAAUCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KA134971.1 |
|
2.5 | TSA: Vitis vinifera Locus_558_Transcript_12/16_Confidence_0.256.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| KA145611.1 |
|
2.5 | TSA: Vitis vinifera Locus_1589_Transcript_9/15_Confidence_0.286.Vivi mRNA sequence | NA | coding protein | psRNATarget |