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BaseInfo

ncRNA ID novel_vvi_miR646
Species Vitis vinifera
Class miRNA
Genome position Chr14:1114067-1114212 [+]
Reference genome 12X
Source SRR1528358
Length 24
Mature sequence(if miRNA) 1 - GACCCACUUAAAGAUCGUGCCGAG - 24
Stem-loop(if miRNA) --                    CGAGC               A              -  A      CCCAUA    C
  GACCCACUUAAAGAUCGUGC     UGGGCUGGUCCAUGC AGGCAAAUAGGUGG CC ACACGA      AGUC G
  ||||||||||||||||||||     ||||||||||||||| |||||||||||||| || ||||||      ||||
  CUGGGUGAAUUUUUAGUACG     ACCUGGCCGGGUACG UCCGUUUAUUCACC GG UGUGUU      UCGG C
UA                    -----               G              A  C      ----AA    G
Stem-loop sequence GACCCACUUAAAGAUCGUGCCGAGCUGGGCUGGUCCAUGCAAGGCAAAUAGGUGGCCAACACGACCCAUAAGUCCGCGGGCUAAUUGUGUCGGACCACUUAUUUGCCUGGCAUGGGCCGGUCCAGCAUGAUUUUUAAGUGGGUCAU