ncRNA ID | novel_vvi_miR644 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:8154646-8154743 [+] |
Reference genome | 12X |
Source | SRR1528358;SRR1528387 |
Length | 24 |
Mature sequence(if miRNA) | 75 - AUAGUCAAAGCCGUAGUCACCAAC - 98 |
Stem-loop(if miRNA) |
--    A           -   U   --U      U C           C   UGGU ACUACGGUUUU AUU UUU   AAAACA U AAAACCGUAGU A   |||| ||||||||||| ||| |||   |||||| | ||||||||||| C   ACCA UGAUGCCGAAA UGA AAA   UUUUGU A UUUUGGCAUCA C CA    C           C   U   CAU      C A           A |
Stem-loop sequence | UGGUAACUACGGUUUUAUUUUUUUAAAACAUUCAAAACCGUAGUCACCAACUACGGUUUUAACUGUUUUUACAAAUAGUCAAAGCCGUAGUCACCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |