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BaseInfo

ncRNA ID novel_vvi_miR644
Species Vitis vinifera
Class miRNA
Genome position Chr14:8154646-8154743 [+]
Reference genome 12X
Source SRR1528358;SRR1528387
Length 24
Mature sequence(if miRNA) 75 - AUAGUCAAAGCCGUAGUCACCAAC - 98
Stem-loop(if miRNA) --    A           -   U   --U      U C           C
  UGGU ACUACGGUUUU AUU UUU   AAAACA U AAAACCGUAGU A
  |||| ||||||||||| ||| |||   |||||| | ||||||||||| C
  ACCA UGAUGCCGAAA UGA AAA   UUUUGU A UUUUGGCAUCA C
CA    C           C   U   CAU      C A           A
Stem-loop sequence UGGUAACUACGGUUUUAUUUUUUUAAAACAUUCAAAACCGUAGUCACCAACUACGGUUUUAACUGUUUUUACAAAUAGUCAAAGCCGUAGUCACCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   CAACCACUGAUGCCGAAACUGAUA   1
  ||||||||||||||||||||=|||
targets:3   GUUGGUGACUACGGCUUUGAUUAU   26

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget