ncRNA ID | lus-miR398b |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | NA - UGUGUUCUCAGGUCACCCCU - NA |
Stem-loop(if miRNA) |
UCA    -        C      --              --   U     CUACAUUUCCAUCUC   UUCUAUUUUCUUAUAUUUAUUCGGGAG    UGUC UCUGUGUU UCAGGU  CACCCCUCUGGGUC  ACC UAUUU               AAA                           C    |||| |||||||| ||||||  ||||||||||||||  ||| |||||               |||                           G    GCAG AGACACAA AGUCCA  GUGGGGAGACCUAG  UGG AUAAA               UAU                           A -AG    C        A      AC              AU   U     ---------CAAAUC   AGAAAGCUCUUGCAUACACAGAGUUGC |
Stem-loop sequence | UCAUGUCUCUGUGUUCUCAGGUCACCCCUCUGGGUCACCUUAUUUCUACAUUUCCAUCUCAAAUUCUAUUUUCUUAUAUUUAUUCGGGAGCGACGUUGAGACACAUACGUUCUCGAAAGAUAUCUAAACAAAUAUGGUUAGAUCCAGAGGGGUGCAACCUGAAAACACAGACGACGGA |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |