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BaseInfo

ncRNA ID lus-miR398b
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 20
Mature sequence(if miRNA) NA - UGUGUUCUCAGGUCACCCCU - NA
Stem-loop(if miRNA) UCA    -        C      --              --   U     CUACAUUUCCAUCUC   UUCUAUUUUCUUAUAUUUAUUCGGGAG
   UGUC UCUGUGUU UCAGGU  CACCCCUCUGGGUC  ACC UAUUU               AAA                           C
   |||| |||||||| ||||||  ||||||||||||||  ||| |||||               |||                           G
   GCAG AGACACAA AGUCCA  GUGGGGAGACCUAG  UGG AUAAA               UAU                           A
-AG    C        A      AC              AU   U     ---------CAAAUC   AGAAAGCUCUUGCAUACACAGAGUUGC
Stem-loop sequence UCAUGUCUCUGUGUUCUCAGGUCACCCCUCUGGGUCACCUUAUUUCUACAUUUCCAUCUCAAAUUCUAUUUUCUUAUAUUUAUUCGGGAGCGACGUUGAGACACAUACGUUCUCGAAAGAUAUCUAAACAAAUAUGGUUAGAUCCAGAGGGGUGCAACCUGAAAACACAGACGACGGA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).