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BaseInfo

ncRNA ID	novel_vvi_miR629
Species	Vitis vinifera
Class	miRNA
Genome position	Chr12:1137541-1137598 [-]
Reference genome	12X
Source	SRR1528358
Length	21
Mature sequence(if miRNA)	1 - AUUUUUUGGUUAUGGUUGGCU - 21
Stem-loop(if miRNA)	AG    U        AG     CACAACUU   AGCU AACUAUAG  UAAGA        U   |||| ||||||||  |||||   UCGG UUGGUAUU  GUUUU        G --    -        -G     UUACUUAA
Stem-loop sequence	AGAGCUUAACUAUAGAGUAAGACACAACUUUGAAUUCAUUUUUUGGUUAUGGUUGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002268856.3	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   ||||||||||||||||||||| targets:2153   AGCCAACCAUAACCAAAAAAU   2173 Target Full Sequence	0.0	PREDICTED: Vitis vinifera protein NTM1-like 9 (LOC100252386), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010663232.2	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   ||||||||||||||||||||| targets:2225   AGCCAACCAUAACCAAAAAAU   2245 Target Full Sequence	0.0	PREDICTED: Vitis vinifera protein NTM1-like 9 (LOC100252386), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA167626.1	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   *|||||*|||*|||||||||| targets:1216   UGCCAAACAUCACCAAAAAAU   1236 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12455_Transcript_1/3_Confidence_0.714.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654302.2	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   *|||||*|||*|||||||||| targets:1562   UGCCAAACAUCACCAAAAAAU   1582 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized protein At1g04910 (LOC100241672), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019221229.1	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   *|||||*|||*|||||||||| targets:1583   UGCCAAACAUCACCAAAAAAU   1603 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized protein At1g04910 (LOC100241672), transcript variant X3, mRNA	NA	coding protein	psRNATarget
KA167625.1	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   *|||||*|||*|||||||||| targets:1579   UGCCAAACAUCACCAAAAAAU   1599 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12455_Transcript_2/3_Confidence_0.571.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654301.2	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   *|||||*|||*|||||||||| targets:1730   UGCCAAACAUCACCAAAAAAU   1750 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized protein At1g04910 (LOC100241672), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010663226.2	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   =||||==|||||||||||||* targets:1487   GGCCAGUCAUAACCAAAAAAA   1507 Target Full Sequence	3.0	PREDICTED: Vitis vinifera protein NTM1-like 9 (LOC104881856), mRNA	NA	coding protein	psRNATarget
KA147011.1	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   =||||==|||||||||||||* targets:1509   GGCCAGUCAUAACCAAAAAAA   1529 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_1390_Transcript_8/8_Confidence_0.796.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA147010.1	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   =||||==|||||||||||||* targets:1604   GGCCAGUCAUAACCAAAAAAA   1624 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_1390_Transcript_6/8_Confidence_0.796.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA147009.1	ncRNA:21   UCGGUUGGUAUUGGUUUUUUA   1   =||||==|||||||||||||* targets:1612   GGCCAGUCAUAACCAAAAAAA   1632 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_1390_Transcript_4/8_Confidence_0.796.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA158810.1	ncRNA:21   UCGGU-UGGUAUUGGUUUUUUA   1   |*|||-|||||||||||||||* targets:21   AUCCAGACCAUAACCAAAAAAC   42 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_19071_Transcript_5/5_Confidence_0.300.Vivi mRNA sequence	NA	coding protein	psRNATarget