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BaseInfo

ncRNA ID novel_vvi_miR628
Species Vitis vinifera
Class miRNA
Genome position Chr12:20531593-20531806 [-]
Reference genome 12X
Source SRR1528358;SRR1528387
Length 24
Mature sequence(if miRNA) 1 - AAAAAUGUCAUUGUCACAUCAGUC - 24
Stem-loop(if miRNA) --   UAA                G         UU    U  U  C  ---      ----       --         -A     CC    --A     -A    AAG   AG
  CUG   UGGCAGUGACAUUUUU GAAUUGUUG  AUAA GA UG CA   UCUUUU    UGAAAGA  GAAAGUGUC  GCUAU  UGGU   CAUGG  AGGA   UUG  A
  |||   |||||||||||||||| |||||||||  |||| || || ||   ||||||    |||||||  |||||||||  |||||  ||||   |||||  ||||   |||
  GAC   ACUGUUACUGUAAAAA UUUAAUAGU  UGUU CU AC GU   AGAAAA    ACUUUCU  UUUUUACGG  CGAUG  GUCA   GUACC  UCCU   AAC  A
CU   UAC                G         UC    -  U  U  AAA      AGUU       UA         AA     AA    ACC     CC    --A   CC
Stem-loop sequence CUGUAAUGGCAGUGACAUUUUUGGAAUUGUUGUUAUAAUGAUUGCCAUCUUUUUGAAAGAGAAAGUGUCAGCUAUCCUGGUACAUGGAAGGAAAGUUGAGAACCCAAAUCCUCCCCAUGCCAACUGAAGUAGCAAGGCAUUUUUAUUCUUUCAUUGAAAAAGAAAAUGUCAUUCUUGUCUUGAUAAUUUGAAAAAUGUCAUUGUCACAUCAGUC