ncRNA ID | novel_vvi_miR628 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:20531593-20531806 [-] |
Reference genome | 12X |
Source | SRR1528358;SRR1528387 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAAUGUCAUUGUCACAUCAGUC - 24 |
Stem-loop(if miRNA) |
--   UAA                G         UU    U  U  C  ---      ----       --         -A     CC    --A     -A    AAG   AG   CUG   UGGCAGUGACAUUUUU GAAUUGUUG  AUAA GA UG CA   UCUUUU    UGAAAGA  GAAAGUGUC  GCUAU  UGGU   CAUGG  AGGA   UUG  A   |||   |||||||||||||||| |||||||||  |||| || || ||   ||||||    |||||||  |||||||||  |||||  ||||   |||||  ||||   |||   GAC   ACUGUUACUGUAAAAA UUUAAUAGU  UGUU CU AC GU   AGAAAA    ACUUUCU  UUUUUACGG  CGAUG  GUCA   GUACC  UCCU   AAC  A CU   UAC                G         UC    -  U  U  AAA      AGUU       UA         AA     AA    ACC     CC    --A   CC |
Stem-loop sequence | CUGUAAUGGCAGUGACAUUUUUGGAAUUGUUGUUAUAAUGAUUGCCAUCUUUUUGAAAGAGAAAGUGUCAGCUAUCCUGGUACAUGGAAGGAAAGUUGAGAACCCAAAUCCUCCCCAUGCCAACUGAAGUAGCAAGGCAUUUUUAUUCUUUCAUUGAAAAAGAAAAUGUCAUUCUUGUCUUGAUAAUUUGAAAAAUGUCAUUGUCACAUCAGUC |