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BaseInfo

ncRNA ID	novel_vvi_miR626
Species	Vitis vinifera
Class	miRNA
Genome position	Chr12:12572841-12572981 [+]
Reference genome	12X
Source	SRR1528358
Length	23
Mature sequence(if miRNA)	1 - UUUUCAAAAUGAAAAUCGAGCUU - 23
Stem-loop(if miRNA)	--        A                   C                G A      -   A         A   UUUUCAAA UGAAAAUCGAGCUUGCCAU GAGUGGGAAACGCAUU A CCGAAA UGC GGGUCCACA A   |||||||| ||||||||||||||||||| |||||||||||||||| | |||||| ||| ||||||||| A   AAAAGUUU AUUUUUAGCUCGAACGGUA CUCACCUUUUGCGUAA U GGCUUU ACG CCCAGGUGU U UU        -                   A                G C      U   C         U
Stem-loop sequence	UUUUCAAAAUGAAAAUCGAGCUUGCCAUCGAGUGGGAAACGCAUUGAACCGAAAUGCAGGGUCCACAAAAUUUGUGGACCCCGCAUUUUCGGCUGAAUGCGUUUUCCACUCAAUGGCAAGCUCGAUUUUUAUUUGAAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA134663.1	ncRNA:23   UUCGAGCUAAAAGUAAAACUUUU   1   ***=|=|||||||||||||=||| targets:1224   CUAUUUGAUUUUCAUUUUGGAAA   1246 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12463_Transcript_3/6_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019221938.1	ncRNA:23   UUC---GAGCUAAAAGUAAAACUUUU   1   |||---||||*||||||||||*|||| targets:1925   AAGACUCUCGUUUUUCAUUUUUAAAA   1950 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC104880380 (LOC104880380), transcript variant X2, mRNA	NA	coding protein	psRNATarget
KA138317.1	ncRNA:23   UUCGAGCUAAAAGUAAAACUUUU   1   *=|=||*|||||||*|||||||| targets:2866   CGGUUCAAUUUUCACUUUGAAAA   2888 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_16340_Transcript_3/9_Confidence_0.387.Vivi mRNA sequence	NA	coding protein	psRNATarget