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BaseInfo

ncRNA ID	novel_vvi_miR623
Species	Vitis vinifera
Class	miRNA
Genome position	Chr9:3708331-3708411 [-]
Reference genome	12X
Source	SRR1528358
Length	24
Mature sequence(if miRNA)	1 - UUAUGUUGGUUGAUGUUAAUGAGU - 24
Stem-loop(if miRNA)	--                           G    C    U   UUAUUAAUAUUAAUUAAUAUAAUUAAA UAAA UUAU A   ||||||||||||||||||||||||||| |||| |||| U   AGUAAUUGUAGUUGGUUGUAUUAAUUU AUUU AAUA C UG                           G    A    A
Stem-loop sequence	UUAUUAAUAUUAAUUAAUAUAAUUAAAGUAAACUUAUUAUCAAUAAAUUUAGUUUAAUUAUGUUGGUUGAUGUUAAUGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA139149.1	ncRNA:24   UGAGUAAUUGUAGUUGGUUGUAUU   1   |||||||=|||||||||||||||| targets:1979   ACUCAUUGACAUCAACCAACAUAA   2002 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_1202_Transcript_8/9_Confidence_0.400.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142775.1	ncRNA:24   UGAGUAAUUGUAGUUGGUUGUAUU   1   ||*==|||||||||*||||||||| targets:1295   ACGUGUUAACAUCAUCCAACAUAA   1318 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_3457_Transcript_8/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142774.1	ncRNA:24   UGAGUAAUUGUAGUUGGUUGUAUU   1   ||*==|||||||||*||||||||| targets:1395   ACGUGUUAACAUCAUCCAACAUAA   1418 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_3457_Transcript_5/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_019224211.1	ncRNA:24   UGAGUAAUUGUAGUUGGUUGUAUU   1   ||*=|||=|=|||||||||||||| targets:6971   ACCUAUUGAUAUCAACCAACAUAA   6994 Target Full Sequence	2.0	PREDICTED: Vitis vinifera uncharacterized LOC100263302 (LOC100263302), transcript variant X2, mRNA	NA	coding protein	psRNATarget
KA134758.1	ncRNA:24   UGAGUAAUUGUAGUUGGUUGUAUU   1   |||-||||||*|||||||=||||| targets:2721   ACU-AUUAACCUCAACCAGCAUAA   2743 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_2723_Transcript_4/11_Confidence_0.440.Vivi mRNA sequence	NA	coding protein	psRNATarget