ncRNA ID | novel_vvi_miR620 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:18732831-18733018 [+] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 24 |
Mature sequence(if miRNA) | 165 - GAGGGUACGAAGAAUGUGACGAUU - 188 |
Stem-loop(if miRNA) |
--  C                   G G         G A        -   ---G        CA        U  AUCACCUCCCA GUGUAACAAACUAA   UC UCACAUUCUUCGUACCCUU U AAUUUUUUA U UUUUUGGA UUU    GAUUUUUU  GAUAUCAU UG           A              U   || ||||||||||||||||||| | ||||||||| | |||||||| |||    ||||||||  |||||||| ||           |   AG AGUGUAAGAAGCAUGGGAG G UUAAGAGGU A AGAAACCU AAA    UUAAAAAA  CUGUAGUA AC           G              U UU  C                   G -         G -        C   AAUU        CC        U  ----------C AACCUACAACAAAU |
Stem-loop sequence | UCCUCACAUUCUUCGUACCCUUGUGAAUUUUUUAGUAUUUUUGGAUUUGGAUUUUUUCAGAUAUCAUUUGAUCACCUCCCAAGUGUAACAAACUAAUUUAAACAACAUCCAAGCCAUAUGAUGUCCCAAAAAAUUUUAAAAACUCCAAAGAAGUGGAGAAUUGGGAGGGUACGAAGAAUGUGACGAUU |