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BaseInfo

ncRNA ID novel_vvi_miR620
Species Vitis vinifera
Class miRNA
Genome position Chr12:18732831-18733018 [+]
Reference genome 12X
Source SRR1528357
Length 24
Mature sequence(if miRNA) 165 - GAGGGUACGAAGAAUGUGACGAUU - 188
Stem-loop(if miRNA) --  C                   G G         G A        -   ---G        CA        U  AUCACCUCCCA GUGUAACAAACUAA
  UC UCACAUUCUUCGUACCCUU U AAUUUUUUA U UUUUUGGA UUU    GAUUUUUU  GAUAUCAU UG           A              U
  || ||||||||||||||||||| | ||||||||| | |||||||| |||    ||||||||  |||||||| ||           |
  AG AGUGUAAGAAGCAUGGGAG G UUAAGAGGU A AGAAACCU AAA    UUAAAAAA  CUGUAGUA AC           G              U
UU  C                   G -         G -        C   AAUU        CC        U  ----------C AACCUACAACAAAU
Stem-loop sequence UCCUCACAUUCUUCGUACCCUUGUGAAUUUUUUAGUAUUUUUGGAUUUGGAUUUUUUCAGAUAUCAUUUGAUCACCUCCCAAGUGUAACAAACUAAUUUAAACAACAUCCAAGCCAUAUGAUGUCCCAAAAAAUUUUAAAAACUCCAAAGAAGUGGAGAAUUGGGAGGGUACGAAGAAUGUGACGAUU