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BaseInfo

ncRNA ID	novel_vvi_miR615
Species	Vitis vinifera
Class	miRNA
Genome position	Chr9:7012509-7012591 [+]
Reference genome	12X
Source	SRR1528357;SRR1528363;SRR1528369;SRR1528370;SRR1528371;SRR1528372;SRR1528373;SRR1528375;SRR1528377;SRR1528378;SRR1528380;SRR1528381;SRR1528383;SRR1528385;SRR1528405;SRR1528407;SRR2029784;SRR890731;SRR1049294
Length	21
Mature sequence(if miRNA)	63 - UUGAGCCGCGCCAAUAUCACU - 83
Stem-loop(if miRNA)	--C          A            A    GA   A   UU    GAUGUUGGUG GGUUCAAUCUGA GAUU  UUU UGC  G    |||||||||| |||||||||||| ||||  ||| |||    CUAUAACCGC CCGAGUUAGACU CUAG  AAA AUG  A UCA          G            -    UC   A   UA
Stem-loop sequence	CGAUGUUGGUGAGGUUCAAUCUGAAGAUUGAUUUAUGCUUGAAUGUAAAAACUGAUCUCAGAUUGAGCCGCGCCAAUAUCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA156503.1	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   ||*|||||||||||||||||| targets:1589   AGGGAUAUUGGCGCGGCUCAA   1609 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_4453_Transcript_3/8_Confidence_0.250.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010664124.2	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   ||*|||||||||||||||||| targets:1664   AGGGAUAUUGGCGCGGCUCAA   1684 Target Full Sequence	1.0	PREDICTED: Vitis vinifera scarecrow-like protein 22 (LOC100252271), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010663377.2	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   ||*|||||||||||||||||| targets:1595   AGGGAUAUUGGCGCGGCUCAA   1615 Target Full Sequence	1.0	PREDICTED: Vitis vinifera scarecrow-like protein 27 (LOC100267664), mRNA	NA	coding protein	psRNATarget
KA147554.1	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   ||*|||||||||||||||||| targets:1617   AGGGAUAUUGGCGCGGCUCAA   1637 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_15685_Transcript_1/2_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010664120.2	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   ||*|||||||||||||||||| targets:1852   AGGGAUAUUGGCGCGGCUCAA   1872 Target Full Sequence	1.0	PREDICTED: Vitis vinifera scarecrow-like protein 22 (LOC100252271), transcript variant X1, mRNA	NA	coding protein	psRNATarget
FQ387249.1	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   =|*|||||||||||||||||| targets:125   GGGGAUAUUGGCGCGGCUCAA   145 Target Full Sequence	1.0	Vitis vinifera clone SS0AEB27YD06	NA	coding protein	psRNATarget
FQ396308.1	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   =|*|||||||||||||||||| targets:723   GGCGAUAUUGGCGCGGCUCAA   743 Target Full Sequence	1.0	Vitis vinifera clone SS0AFA10YI14	NA	coding protein	psRNATarget
XM_002268409.4	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   =|*|||||||||||||||||| targets:738   GGCGAUAUUGGCGCGGCUCAA   758 Target Full Sequence	1.0	PREDICTED: Vitis vinifera scarecrow-like protein 15 (LOC100251313), mRNA	NA	coding protein	psRNATarget
KA139855.1	ncRNA:21   UCACUAUAACCGCGCCGAGUU   1   =|*|||||||*|||||||||| targets:124   GGAGAUAUUGACGCGGCUCAA   144 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_55207_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget