ncRNA ID | novel_vvi_miR612 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr1:1827985-1828060 [+] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAGAUGUCUGGCCGAGUGAUGG - 24 |
Stem-loop(if miRNA) |
--       G     CC  --G      --  -      UU   AAGAGAU UCUGG  GA   UGAUGG  UG AGGUAG  C   ||||||| |||||  ||   ||||||  || ||||||   UUCUCUA GGACC  CU   GCUACU  AC UCCGUU  A AA       -     CU  AUA      GA  A      UG |
Stem-loop sequence | AAGAGAUGUCUGGCCGAGUGAUGGUGAGGUAGUUCAGUUUGCCUACAAGUCAUCGAUAUCUCCCAGGAUCUCUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019218845.1 |
|
2.5 | PREDICTED: Vitis vinifera uncharacterized LOC109122310 (LOC109122310), mRNA | NA | coding protein | psRNATarget | |||||||||
KA156386.1 |
|
2.5 | TSA: Vitis vinifera Locus_20_Transcript_30/31_Confidence_0.026.Vivi mRNA sequence | NA | coding protein | psRNATarget |