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BaseInfo

ncRNA ID	novel_vvi_miR608
Species	Vitis vinifera
Class	miRNA
Genome position	Chr8:2169731-2169928 [+]
Reference genome	12X
Source	SRR1528357;SRR1528358;SRR1528363;SRR1528371;SRR1528376;SRR1048206;SRR1528385;SRR1528391;SRR1528393;SRR1528394;SRR1528396;SRR1528412;SRR2029784;SRR1049295
Length	21
Mature sequence(if miRNA)	178 - UCAGGGCAGCAGCAUACUACU - 198
Stem-loop(if miRNA)	--                 U    UAUCU    GA       -C   U   -          A            CAUGG    ------UU   UGCUGGGUUG   UAGUAUGCUGCUGUCUU AGAA     GGAU  AGUUUAU  UCU CAA GGUGGCAAGA CAUCAAGGGUAU     UGAC        CUC          A   ||||||||||||||||| ||||     ||||  |||||||  ||| ||| |||||||||| ||||||||||||     ||||        |||          U   AUCAUACGACGACGGGA UCUU     CUUA  UCGAGUA  AGA GUU CCACCGUUUU GUAGUUCUCAUA     ACUG        UGG          G UC                 C    CAACU    AC       CU   C   U          G            -----    UAGUUUAG   AGUCUUCUUC
Stem-loop sequence	UAGUAUGCUGCUGUCUUUAGAAUAUCUGGAUGAAGUUUAUCUCUUCAAGGUGGCAAGAACAUCAAGGGUAUCAUGGUGACUUCUCUGCUGGGUUGAUGCUUCUUCUGAGGUGAUUUGAUGUCAAUACUCUUGAUGGUUUUGCCACCUUUGCAGAUCAUGAGCUCAAUUCUCAACUUCUCAGGGCAGCAGCAUACUACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA173529.1	ncRNA:21   UCAUCAUACGACGACGGGACU   1   ||||||||||||||||||||| targets:470   AGUAGUAUGCUGCUGCCCUGA   490 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_22326_Transcript_2/3_Confidence_0.750.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA172505.1	ncRNA:21   UCAUCAUACGACGACGGGACU   1   ||||||||||||||||||||| targets:387   AGUAGUAUGCUGCUGCCCUGA   407 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_23064_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
FQ379143.1	ncRNA:21   UCAUCAUACGACGACGGGACU   1   ||||||||||||||||||||| targets:213   AGUAGUAUGCUGCUGCCCUGA   233 Target Full Sequence	0.0	Vitis vinifera clone SS0AEB11YF11	NA	coding protein	psRNATarget
XM_019218079.1	ncRNA:21   UCAUCAUACGACGACGGGACU   1   ||||||||||||||||||||| targets:214   AGUAGUAUGCUGCUGCCCUGA   234 Target Full Sequence	0.0	PREDICTED: Vitis vinifera sulfated surface glycoprotein 185 (LOC100852467), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_003634992.3	ncRNA:21   UCAUCAUACGACGACGGGACU   1   ||||||||||||||||||||| targets:232   AGUAGUAUGCUGCUGCCCUGA   252 Target Full Sequence	0.0	PREDICTED: Vitis vinifera sulfated surface glycoprotein 185 (LOC100852467), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010647974.2	ncRNA:21   UCAUCAUACGACGACGGGACU   1   ||||||||||||||||||||| targets:240   AGUAGUAUGCUGCUGCCCUGA   260 Target Full Sequence	0.0	PREDICTED: Vitis vinifera sulfated surface glycoprotein 185 (LOC100852467), transcript variant X2, mRNA	NA	coding protein	psRNATarget