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BaseInfo

ncRNA ID	novel_vvi_miR606
Species	Vitis vinifera
Class	miRNA
Genome position	Chr19:10730161-10730258 [+]
Reference genome	12X
Source	SRR1048204
Length	24
Mature sequence(if miRNA)	75 - AUGCUUUCUAGAAUCACUCCCAAA - 98
Stem-loop(if miRNA)	--   UAA               C     A     C         A  U   UGG   UGAUUCUAGGAAGCA UUUUA UAUUU UAAUACUUG AA U   |||   ||||||||||||||| ||||| ||||| ||||||||| ||   ACC   ACUAAGAUCUUUCGU AAGAU GUAAA AUUGUGAAU UU U AA   CUC               A     C     A         A  U
Stem-loop sequence	UGGUAAUGAUUCUAGGAAGCACUUUUAAUAUUUCUAAUACUUGAAAUUUUUUAUAAGUGUUAAAAAUGCUAGAAAUGCUUUCUAGAAUCACUCCCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA141014.1	ncRNA:24   AAACCCUCACUAAGAUCUUUCGUA   1   |||||||||||||||||||||||| targets:2654   UUUGGGAGUGAUUCUAGAAAGCAU   2677 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_7473_Transcript_8/9_Confidence_0.625.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA168209.1	ncRNA:24   AAACCCUCACUAAGAUCUUUCGUA   1   |||*|||||||||=|||||||||| targets:2272   UUUAGGAGUGAUUUUAGAAAGCAU   2295 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_9763_Transcript_2/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA140914.1	ncRNA:24   AAACCCUCACUAAGAUCUUUCGUA   1   |||**||||||||=|||||||||| targets:6921   UUUAAGAGUGAUUUUAGAAAGCAU   6944 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_2960_Transcript_9/10_Confidence_0.545.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010648440.2	ncRNA:24   AAACCCUCACUAAGAUCUUUCGUA   1   |||||*||||||||||||||*||| targets:714   UUUGGUAGUGAUUCUAGAAAACAU   737 Target Full Sequence	2.5	PREDICTED: Vitis vinifera GATA transcription factor 26-like (LOC100262620), mRNA	NA	coding protein	psRNATarget
KA138708.1	ncRNA:24   AAACCCUCACUAAGAUCUUUCGUA   1   *|||**|||||||||||=|||||| targets:2529   AUUGAUAGUGAUUCUAGGAAGCAU   2552 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12129_Transcript_2/5_Confidence_0.636.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA138707.1	ncRNA:24   AAACCCUCACUAAGAUCUUUCGUA   1   *|||**|||||||||||=|||||| targets:2569   AUUGAUAGUGAUUCUAGGAAGCAU   2592 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_12129_Transcript_1/5_Confidence_0.636.Vivi mRNA sequence	NA	coding protein	psRNATarget