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BaseInfo

ncRNA ID	novel_vvi_miR603
Species	Vitis vinifera
Class	miRNA
Genome position	Chr6:9399684-9399765 [-]
Reference genome	12X
Source	SRR1528357;SRR1528370
Length	22
Mature sequence(if miRNA)	61 - UUGCAUGACAAAAGAUACUUCA - 82
Stem-loop(if miRNA)	--   C   A                              U   UUG AUG CAAAAGAUACUUCAUUAUUAUUCCAGAGGG U   ||| ||| ||||||||||||||||||||||||||||||   AAC UAC GUUUUCUAUGAAGUAAUAAUAAGGUCUUCC A GU   C   A                              G
Stem-loop sequence	UUGCAUGACAAAAGAUACUUCAUUAUUAUUCCAGAGGGUUAGCCUUCUGGAAUAAUAAUGAAGUAUCUUUUGACAUCCAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA155300.1	ncRNA:22   ACUUCAUAGAAAACAGUACGUU   1   ||=||||*|||*|||||||||| targets:75   UGGAGUAACUUCUGUCAUGCAA   96 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_37061_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA167317.1	ncRNA:22   ACUUCAUAGAAAACAGUACGUU   1   |***||||||*||||||||||| targets:702   UCUUGUAUCUGUUGUCAUGCAA   723 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1888_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002270967.4	ncRNA:22   ACUUCAUAGAAAACAGUACGUU   1   |***||||||*||||||||||| targets:937   UCUUGUAUCUGUUGUCAUGCAA   958 Target Full Sequence	2.5	PREDICTED: Vitis vinifera beta-carotene isomerase D27, chloroplastic (LOC100253777), mRNA	NA	coding protein	psRNATarget
FQ395128.1	ncRNA:22   ACUUCAUAGAAAACAGUACGUU   1   |*=||*||||||||||*||||| targets:1019   UAGAGAAUCUUUUGUCCUGCAA   1040 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA17YJ21	NA	coding protein	psRNATarget
XM_002272206.4	ncRNA:22   ACUUCAUAGAAAACAGUACGUU   1   |*=||*||||||||||*||||| targets:1043   UAGAGAAUCUUUUGUCCUGCAA   1064 Target Full Sequence	2.5	PREDICTED: Vitis vinifera short-chain dehydrogenase TIC 32, chloroplastic (LOC100247484), transcript variant X1, mRNA	NA	coding protein	psRNATarget