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BaseInfo

ncRNA ID novel_vvi_miR602
Species Vitis vinifera
Class miRNA
Genome position Chr5:12322697-12322784 [-]
Reference genome 12X
Source SRR1528357
Length 21
Mature sequence(if miRNA) 1 - ACUUUUGUUCUAGGUGAGACU - 21
Stem-loop(if miRNA) --                           CUUCUUACCC      AUG
  UCUCACCUAGAACAAAAGUAAUGGAGU          UUGAUA   A
  |||||||||||||||||||||||||||          ||||||
  AGAGUGGAUCUUGUUUUCAUUAUCUCA          AAUUGU   A
UC                           --------UU      AAU
Stem-loop sequence UCUCACCUAGAACAAAAGUAAUGGAGUCUUCUUACCCUUGAUAAUGAAUAAUGUUAAUUACUCUAUUACUUUUGUUCUAGGUGAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA162123.1
ncRNA:21   UCAGAGUGGAUCUUGUUUUCA   1
  |||||||||||||||||||||
targets:1533   AGUCUCACCUAGAACAAAAGU   1553

0.0 TSA: Vitis vinifera Locus_1040_Transcript_3/4_Confidence_0.667.Vivi mRNA sequence NA coding protein psRNATarget