ncRNA ID | novel_vvi_miR602 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr5:12322697-12322784 [-] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACUUUUGUUCUAGGUGAGACU - 21 |
Stem-loop(if miRNA) |
--                           CUUCUUACCC      AUG   UCUCACCUAGAACAAAAGUAAUGGAGU          UUGAUA   A   |||||||||||||||||||||||||||          ||||||   AGAGUGGAUCUUGUUUUCAUUAUCUCA          AAUUGU   A UC                           --------UU      AAU |
Stem-loop sequence | UCUCACCUAGAACAAAAGUAAUGGAGUCUUCUUACCCUUGAUAAUGAAUAAUGUUAAUUACUCUAUUACUUUUGUUCUAGGUGAGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA162123.1 |
|
0.0 | TSA: Vitis vinifera Locus_1040_Transcript_3/4_Confidence_0.667.Vivi mRNA sequence | NA | coding protein | psRNATarget |