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BaseInfo

ncRNA ID	novel_vvi_miR601
Species	Vitis vinifera
Class	miRNA
Genome position	Chr5:20962012-20962129 [+]
Reference genome	12X
Source	SRR1528357
Length	21
Mature sequence(if miRNA)	98 - AAUUACUGUCAAACACACUCU - 118
Stem-loop(if miRNA)	--          GU   UAU                A  U  AC            AAU   AGUGUGUUUG  AGU   UUUUAGAAGUGUUUUU GU UU  UAGUACUUGAAA   A   ||||||||||  |||   |||||||||||||||| || ||  ||||||||||||   A   UCACACAAAC  UCA   AAGAUUUUUACAAAAA CA AA  AUUAUGGAUUUU   A UC          UG   -UU                A  U  AA            AAA
Stem-loop sequence	AGUGUGUUUGGUAGUUAUUUUUAGAAGUGUUUUUAGUUUUACUAGUACUUGAAAAAUAAAAAAUUUUAGGUAUUAAAAAUACAAAAAACAUUUUUAGAAUUACUGUCAAACACACUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA152600.1	ncRNA:21   UCUCACACAAACUGUCAUUAA   1   |||||*||||||||||||||| targets:738   AGAGUAUGUUUGACAGUAAUU   758 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_12264_Transcript_1/3_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159796.1	ncRNA:21   UCUCACACAAACUGUCAUUAA   1   ||||||*||||||||||=||| targets:2580   AGAGUGCGUUUGACAGUGAUU   2600 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3174_Transcript_7/8_Confidence_0.565.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA171074.1	ncRNA:21   UCUCACACAAACUGUCAUUAA   1   |||||*|||||||||*||||| targets:179   AGAGUUUGUUUGACAUUAAUU   199 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_38756_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
FQ379415.1	ncRNA:21   UCUCACACAAACUGUCAUUAA   1   **|||||*|||||||||=||| targets:1254   UAAGUGUAUUUGACAGUGAUU   1274 Target Full Sequence	2.5	Vitis vinifera clone SS0AEB10YI01	NA	coding protein	psRNATarget