ncRNA ID | novel_vvi_miR594 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr4:13164198-13164411 [+] |
Reference genome | 12X |
Source | SRR1528357 |
Length | 25 |
Mature sequence(if miRNA) | 1 - AAGGCCAGAGGCCCAGAGCCGUGGC - 25 |
Stem-loop(if miRNA) |
-     C                                                            A         UACUC   U  UACCAGAA      U    AUAA  AAGGC AGAGGCCCAGAGCCGUGGCCCCUCAAUCCACCAAUUGUUUAUUUGUUCCUUUUAUAAAGG GGUGUCCCC     AGA GG        GAUGGU GGAC    G  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     ||| ||        |||||| ||||  UUCCG UCUCCGGGUCUCGGCACCGGGGAGUUAGGUGGUUAACAAAUAAACAGGGAAAAUAUUUCC CCGCAGGGG     UCU CC        CUAUCA CCUG    G C     A                                                            C         ----U   -  ----UAAG      U    AUUU |
Stem-loop sequence | AAGGCCAGAGGCCCAGAGCCGUGGCCCCUCAAUCCACCAAUUGUUUAUUUGUUCCUUUUAUAAAGGAGGUGUCCCCUACUCAGAUGGUACCAGAAGAUGGUUGGACAUAAGGUUUAGUCCUACUAUCGAAUCCUCUUGGGGACGCCCCCUUUAUAAAAGGGACAAAUAAACAAUUGGUGGAUUGAGGGGCCACGGCUCUGGGCCUCUAGCCUUC |