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BaseInfo

ncRNA ID	novel_vvi_miR591
Species	Vitis vinifera
Class	miRNA
Genome position	Chr3:17491664-17491767 [-]
Reference genome	12X
Source	SRR1528357
Length	21
Mature sequence(if miRNA)	1 - AAACACUUUCUAGAAUUACUG - 21
Stem-loop(if miRNA)	--C             CA   C         U    A      ---      A    UGGUUUUAGGAAG  UUU UAACAUUUU AAUA UUGAAA   AUAUUU U    |||||||||||||  ||| ||||||||| |||| ||||||   |||||| A    AUUAAGAUCUUUC  AAA AUUGUAAAG UUAU AAUUUU   UAUAAA A GUC             AC   U         U    G      CAU      A
Stem-loop sequence	CUGGUUUUAGGAAGCAUUUCUAACAUUUUUAAUAAUUGAAAAUAUUUAUAAAAAAUAUUACUUUUAAGUAUUUGAAAUGUUAUAAACACUUUCUAGAAUUACUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA152600.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   ||||||||||||||||||||| targets:751   CAGUAAUUCUAGAAAGUGUUU   771 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_12264_Transcript_1/3_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654642.2	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   *|||||||||||||||||||| targets:2018   AAGUAAUUCUAGAAAGUGUUU   2038 Target Full Sequence	0.0	PREDICTED: Vitis vinifera alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial (LOC100264660), mRNA	NA	coding protein	psRNATarget
KA138952.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   ||||=|||||||||||||||| targets:816   CAGUGAUUCUAGAAAGUGUUU   836 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_4335_Transcript_5/10_Confidence_0.588.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA166591.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   =|||=|||||||||||||||| targets:811   UAGUGAUUCUAGAAAGUGUUU   831 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_1103_Transcript_2/9_Confidence_0.406.Vivi mRNA sequence	NA	coding protein	psRNATarget
FQ390097.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   =|*|=|||||||||||||||| targets:1108   UAAUGAUUCUAGAAAGUGUUU   1128 Target Full Sequence	2.0	Vitis vinifera clone SS0AEB18YL19	NA	coding protein	psRNATarget
XM_002279172.4	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   =|*|=|||||||||||||||| targets:1167   UAAUGAUUCUAGAAAGUGUUU   1187 Target Full Sequence	2.0	PREDICTED: Vitis vinifera peroxidase 20 (LOC100262575), mRNA	NA	coding protein	psRNATarget
KA170970.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   =|||=|||=|||||||||||| targets:163   UAGUGAUUUUAGAAAGUGUUU   183 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_17927_Transcript_6/6_Confidence_0.500.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA170969.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   =|||=|||=|||||||||||| targets:163   UAGUGAUUUUAGAAAGUGUUU   183 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_17927_Transcript_3/6_Confidence_0.611.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA146674.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   *|||=|||=|||||||||||| targets:195   AAGUGAUUUUAGAAAGUGUUU   215 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1161_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA138578.1	ncRNA:21   GUCAUUAAGAUCUUUCACAAA   1   *|||=||||||*||||||||| targets:2259   GAGUGAUUCUAUAAAGUGUUU   2279 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5525_Transcript_9/10_Confidence_0.405.Vivi mRNA sequence	NA	coding protein	psRNATarget