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BaseInfo

ncRNA ID novel_vvi_miR589
Species Vitis vinifera
Class miRNA
Genome position Chr2:15970040-15970107 [+]
Reference genome 12X
Source SRR1528357;SRR1528380
Length 20
Mature sequence(if miRNA) 1 - AUGGAAUGAACUUAUAAUCA - 20
Stem-loop(if miRNA) --A  GA              AUG  A    CUC
   UG  AUGAACUUAUAAUC   GA UUGA   A
   ||  ||||||||||||||   || ||||
   AC  UAUUUGAAUAUUAG   UU AACU   A
AUC  AA              AUA  A    ACU
Stem-loop sequence AUGGAAUGAACUUAUAAUCAUGGAAUUGACUCAAUCAUCAAAUUAUAGAUUAUAAGUUUAUAACACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_002275790.3
ncRNA:20   ACUAAUAUUCAAGUAAGGUA   1
  *||||*|*||||||||||||
targets:1350   GGAUUUUCAGUUCAUUCCAU   1369

2.5 PREDICTED: Vitis vinifera cytochrome P450 CYP736A12 (LOC100259359), mRNA NA coding protein psRNATarget