ncRNA ID | novel_vvi_miR589 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr2:15970040-15970107 [+] |
Reference genome | 12X |
Source | SRR1528357;SRR1528380 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUGGAAUGAACUUAUAAUCA - 20 |
Stem-loop(if miRNA) |
--A  GA              AUG  A    CUC    UG  AUGAACUUAUAAUC   GA UUGA   A    ||  ||||||||||||||   || ||||    AC  UAUUUGAAUAUUAG   UU AACU   A AUC  AA              AUA  A    ACU |
Stem-loop sequence | AUGGAAUGAACUUAUAAUCAUGGAAUUGACUCAAUCAUCAAAUUAUAGAUUAUAAGUUUAUAACACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002275790.3 |
|
2.5 | PREDICTED: Vitis vinifera cytochrome P450 CYP736A12 (LOC100259359), mRNA | NA | coding protein | psRNATarget |