ncRNA ID | novel_vvi_miR585 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:1413046-1413118 [-] |
Reference genome | 12X |
Source | SRR1528357;SRR1528359;SRR1528361;SRR1528371;SRR1528375;SRR1528377;SRR1528416 |
Length | 20 |
Mature sequence(if miRNA) | 54 - UUGGCAUUCUGUCCACCUCC - 73 |
Stem-loop(if miRNA) |
--      U C           -  UCUCUU     UC   UUGGCA U UGUCCACCUCC CA      GAAAA  U   |||||| | ||||||||||| ||      |||||   AACCGU A ACGGGUGGAGG GU      CUUUU  C CC      C U           U  --CUCU     CU |
Stem-loop sequence | UUGGCAUUCUGUCCACCUCCCAUCUCUUGAAAAUCUCUCUUUUCUCUCUGUGGAGGUGGGCAUACUGCCAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010657682.2 |
|
1.0 | PREDICTED: Vitis vinifera F-box only protein 6 (LOC100242085), mRNA | NA | coding protein | psRNATarget |