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BaseInfo

ncRNA ID novel_vvi_miR585
Species Vitis vinifera
Class miRNA
Genome position Chr18:1413046-1413118 [-]
Reference genome 12X
Source SRR1528357;SRR1528359;SRR1528361;SRR1528371;SRR1528375;SRR1528377;SRR1528416
Length 20
Mature sequence(if miRNA) 54 - UUGGCAUUCUGUCCACCUCC - 73
Stem-loop(if miRNA) --      U C           -  UCUCUU     UC
  UUGGCA U UGUCCACCUCC CA      GAAAA  U
  |||||| | ||||||||||| ||      |||||
  AACCGU A ACGGGUGGAGG GU      CUUUU  C
CC      C U           U  --CUCU     CU
Stem-loop sequence UUGGCAUUCUGUCCACCUCCCAUCUCUUGAAAAUCUCUCUUUUCUCUCUGUGGAGGUGGGCAUACUGCCAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010657682.2
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1214   GGAGGUUGACAGAAUGCCAA   1233

1.0 PREDICTED: Vitis vinifera F-box only protein 6 (LOC100242085), mRNA NA coding protein psRNATarget