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BaseInfo

ncRNA ID	novel_vvi_miR584
Species	Vitis vinifera
Class	miRNA
Genome position	Chr16:3111427-3111609 [-]
Reference genome	12X
Source	SRR1528357;SRR1528385;SRR1528417
Length	24
Mature sequence(if miRNA)	160 - AGCUUUGGUCAUGUACUUCUCAAG - 183
Stem-loop(if miRNA)	--                    C    C                                                  C  AAAAC    AAU   AGCUUUGGUCAUGUACUUCU AAGC CAUUAUUCACCUUCUCUUCUUCCCACAUAAAACCUUGAAUAUUCUGCCAA GU     CAUU   C   |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||     ||||   UCGAAACCAGUAUAUGAAGA UUCG GUAAUAAGUGGAAGAGAAGAAGGGUGUAUUUUGGAACUUAUAAGACGGUU CA     GUAG   C UU                    C    A                                                  A  ---CU    AAU
Stem-loop sequence	AGCUUUGGUCAUGUACUUCUCAAGCCCAUUAUUCACCUUCUCUUCUUCCCACAUAAAACCUUGAAUAUUCUGCCAACGUAAAACCAUUAAUCCUAAGAUGUCACAUUGGCAGAAUAUUCAAGGUUUUAUGUGGGAAGAAGAGAAGGUGAAUAAUGAGCUUCAGAAGUAUAUGACCAAAGCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA148873.1	ncRNA:24   GAACUCUUCAUGUACUGGUUUCGA   1   |||*|||||||||||||||||||| targets:95   CUUCAGAAGUACAUGACCAAAGCU   118 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_24475_Transcript_1/6_Confidence_0.611.Vivi mRNA sequence	NA	coding protein	psRNATarget
FQ382341.1	ncRNA:24   GAACUCUUCAUGUACUGGUUUCGA   1   |||*|||||||||||||||||||| targets:961   CUUCAGAAGUACAUGACCAAAGCU   984 Target Full Sequence	0.0	Vitis vinifera clone SS0ABG61YB16	NA	coding protein	psRNATarget
X86924.1	ncRNA:24   GAACUCUUCAUGUACUGGUUUCGA   1   |||*|||||||||||||||||||| targets:1282   CUUCAGAAGUACAUGACCAAAGCU   1305 Target Full Sequence	0.0	V.vinifera mRNA for NAD(H) glutamate dehydrogenase	NA	coding protein	psRNATarget
NM_001281110.1	ncRNA:24   GAACUCUUCAUGUACUGGUUUCGA   1   |||*|||||||||||||||||||| targets:1282   CUUCAGAAGUACAUGACCAAAGCU   1305 Target Full Sequence	0.0	Vitis vinifera glutamate dehydrogenase (GDH), mRNA	NA	coding protein	psRNATarget
XM_019226206.1	ncRNA:24   GAACUCUUCAUGUACUGGUUUCGA   1   |||*|||||||||||||||||||| targets:1271   CUUCAGAAGUACAUGACCAAAGCU   1294 Target Full Sequence	0.0	PREDICTED: Vitis vinifera glutamate dehydrogenase (LOC100263048), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_002278852.4	ncRNA:24   GAACUCUUCAUGUACUGGUUUCGA   1   |||*|||||||||||||||||||| targets:1346   CUUCAGAAGUACAUGACCAAAGCU   1369 Target Full Sequence	0.0	PREDICTED: Vitis vinifera glutamate dehydrogenase (LOC100263048), transcript variant X1, mRNA	NA	coding protein	psRNATarget