ncRNA ID | novel_vvi_miR583 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr18:4890592-4890647 [-] |
Reference genome | 12X |
Source | SRR1048204 |
Length | 24 |
Mature sequence(if miRNA) | 33 - CUAUCACUUAUCAUAUCCUAUGUU - 56 |
Stem-loop(if miRNA) |
--            A   CC     UCA   CUAUCACUUAUC UAU  UAUGU   A   |||||||||||| |||  |||||   GAUAGUGAAUAG AUA  GUACA   C AG            G   AA     CAC |
Stem-loop sequence | CUAUCACUUAUCAUAUCCUAUGUUCAACCACACAUGAAAUAGGAUAAGUGAUAGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA171264.1 |
|
2.5 | TSA: Vitis vinifera Locus_4643_Transcript_4/11_Confidence_0.063.Vivi mRNA sequence | NA | coding protein | psRNATarget |