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BaseInfo

ncRNA ID novel_vvi_miR583
Species Vitis vinifera
Class miRNA
Genome position Chr18:4890592-4890647 [-]
Reference genome 12X
Source SRR1048204
Length 24
Mature sequence(if miRNA) 33 - CUAUCACUUAUCAUAUCCUAUGUU - 56
Stem-loop(if miRNA) --            A   CC     UCA
  CUAUCACUUAUC UAU  UAUGU   A
  |||||||||||| |||  |||||
  GAUAGUGAAUAG AUA  GUACA   C
AG            G   AA     CAC
Stem-loop sequence CUAUCACUUAUCAUAUCCUAUGUUCAACCACACAUGAAAUAGGAUAAGUGAUAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA171264.1
ncRNA:24   UUGUAUCCUAUACUAUUCACUAUC   1
  |=*||||*|||||||||*||||||
targets:127   AGAAUAGAAUAUGAUAACUGAUAG   150

2.5 TSA: Vitis vinifera Locus_4643_Transcript_4/11_Confidence_0.063.Vivi mRNA sequence NA coding protein psRNATarget