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BaseInfo

ncRNA ID novel_vvi_miR578
Species Vitis vinifera
Class miRNA
Genome position Chr14:19624201-19624282 [-]
Reference genome 12X
Source SRR1528357;SRR1528380
Length 20
Mature sequence(if miRNA) 63 - UCUUAGAACCAAGGGCACCC - 82
Stem-loop(if miRNA) --       A    -   CA  C  A    G  -    ACUU
  UCUUAGA CCAA GGG  CC UU AUAU UC CCUG    C
  ||||||| |||| |||  || || |||| || ||||    A
  AGAGUUU GGUU CCC  GG AA UAUG AG GGAU    A
UA       -    A   AG  U  C    G  U    CCUU
Stem-loop sequence UCUUAGAACCAAGGGCACCCUUAAUAUGUCCCUGACUUCAAUUCCUAGGUGAGGUAUCAAUGGGACCCAUUGGUUUGAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019216346.1
ncRNA:20   CCCACGGGAACCAAGAUUCU   1
  ||||||=|||||||||||||
targets:855   GGGUGCUCUUGGUUCUAAGA   874

1.0 PREDICTED: Vitis vinifera uncharacterized mitochondrial protein AtMg00810-like (LOC109121619), mRNA NA coding protein psRNATarget