ncRNA ID | novel_vvi_miR578 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:19624201-19624282 [-] |
Reference genome | 12X |
Source | SRR1528357;SRR1528380 |
Length | 20 |
Mature sequence(if miRNA) | 63 - UCUUAGAACCAAGGGCACCC - 82 |
Stem-loop(if miRNA) |
--       A    -   CA  C  A    G  -    ACUU   UCUUAGA CCAA GGG  CC UU AUAU UC CCUG    C   ||||||| |||| |||  || || |||| || ||||    A   AGAGUUU GGUU CCC  GG AA UAUG AG GGAU    A UA       -    A   AG  U  C    G  U    CCUU |
Stem-loop sequence | UCUUAGAACCAAGGGCACCCUUAAUAUGUCCCUGACUUCAAUUCCUAGGUGAGGUAUCAAUGGGACCCAUUGGUUUGAGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019216346.1 |
|
1.0 | PREDICTED: Vitis vinifera uncharacterized mitochondrial protein AtMg00810-like (LOC109121619), mRNA | NA | coding protein | psRNATarget |